Gene Caul_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3287 
Symbol 
ID5900742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3554349 
End bp3555788 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content72% 
IMG OID641563793 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001684912 
Protein GI167647249 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGT CCGACAACCT CTCCACGCGC ATGACGGCCA TCCTGCTGGC CGGGCTGGCG 
GTCATGCTGG TGATCGGGGC CGCCCTGCTG GTCTGGCCGC AGGGGCGGGG CGAAGGCGGC
GTGCGCTTCT ACCAGCTGCC CCGGCCCTCC GAGGCGCGGG CCATCGTCGA GGCGGTCGAG
GCCAGTCCGC CGTCGGCCCG GCCCAAGGTG GTCAAGGCGC TGGACGCCGG CGTCATCCGC
ACCACGCTGG AGGCCGATTT CCTGCCCCTG CAGCTGCGCG CCCGGGCCGC CGACGCGGGC
GATCCCGGCT ATCGGGCCTA CCGCCAGGCT CTGGGCGAGC GGGACCTGCG GATCGACATC
CGGCGCGGCG GCCGGCTGCG CCAGGACGCC CTGCCCGGCC GCCAGGCCCT GCGGCTGTCG
GTGCGGCTGG CCGACGGCGA GGTGCTGGTG CTGCGCCGTC GCGCCCCTGA GACGGCGCGG
CAATTCTTCA GCCGGGTCTC CCTCGCCGCC GCCGCCCTGC TGGTCGTCAC ACTGCTGATG
CTGGTCCTGG CGGTGCGCCA GACCACCCAG CCGGTCAGCC ATCTGGCCCG CGAGGTCGCG
CGGTTCGGCG ACGACCTGGA CGCCAAGGCC CTGCCGTTGC GGGGGCCGCG CGAGCTGCGC
GAATTGTCCG CGGCCTTCAA CACGATGCAG GGCCGGATAC GAGGGCTGAT AGACGAACGC
ACGCGGATGC TGGCGGCCAT CGCCCACGAC CTGCGCACCT ACCTGACCCG CCTGACCCTG
CGCGCCGAGT TCATCGCCGA CGACGCCCAG CGCGCCAAGG CCGGGAGCGA CCTGGCCGAG
ATGTCCCAGT TGCTGGACGA CACCCTGCTG TTTGCTCGCC AGGACGCCGG ACGCGGCGAC
GGAGCGCGAT CGATCGACGT CCGCCAGGAG CTCGAGACCC TGGTCGCGTT GCGCCTCGAG
ATGGGCCAGG CGGTGTTGCT GGCGCCCGAG ACCGCCGGCG CGGCCTGGGC CTCGCCCCTG
GCCCTGCGCC GTATGGTCGA CAACCTGATC GACAACGCCG CTCGTTACGG CGGGGCGGTG
ACGGTCGACG CCCGTCCCCT CGGCCGCCGC GTCGAGATCA TGGTGCTGGA CGACGGGCCG
GGCCTCCCGG TCGAGATGCT AGAAACGATC ACCGCCCCAT TCGAACGCGG CGAGGTTTCG
CGCAACCGGC GAACCGGCGG CGCGGGCCTG GGCCTGTCGA TCGTCCAGGC CTTGGCCAAG
GGCCAAGGCG GCGCTCTGAC TCTGGCCAAC CGTCCCGAAG GTGGACTCGC GGCGACGATC
GAGCTGCCGG CCGGTCCATC TGGCTGGAAA GGGGCAAGAG CGCCAGGAGC CGACATCTGC
ACGTCTCCAG GAACTGGACG TTCCCGTGCT GCAAGTGACT GCCGGTCTAG GCGCCGTTGA
 
Protein sequence
MMLSDNLSTR MTAILLAGLA VMLVIGAALL VWPQGRGEGG VRFYQLPRPS EARAIVEAVE 
ASPPSARPKV VKALDAGVIR TTLEADFLPL QLRARAADAG DPGYRAYRQA LGERDLRIDI
RRGGRLRQDA LPGRQALRLS VRLADGEVLV LRRRAPETAR QFFSRVSLAA AALLVVTLLM
LVLAVRQTTQ PVSHLAREVA RFGDDLDAKA LPLRGPRELR ELSAAFNTMQ GRIRGLIDER
TRMLAAIAHD LRTYLTRLTL RAEFIADDAQ RAKAGSDLAE MSQLLDDTLL FARQDAGRGD
GARSIDVRQE LETLVALRLE MGQAVLLAPE TAGAAWASPL ALRRMVDNLI DNAARYGGAV
TVDARPLGRR VEIMVLDDGP GLPVEMLETI TAPFERGEVS RNRRTGGAGL GLSIVQALAK
GQGGALTLAN RPEGGLAATI ELPAGPSGWK GARAPGADIC TSPGTGRSRA ASDCRSRRR