| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3177 |
|---|
| Symbol | |
|---|
| ID | 5900632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3441796 |
|---|
| End bp | 3442647 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641563681 |
|---|
| Product | protein of unknown function zinc metallopeptidase putative |
|---|
| Protein accession | YP_001684802 |
|---|
| Protein GI | 167647139 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGGG GTGGGGGACG CCGCGAGGGC AATATCGAAG ATCGCCGCGG TTTAGGCGGC
GGCGTCGGCT TGGCCGGCGG CGGCATCGGG GCGGTGGTGC TGGCGGTGAT CGGCTATTTC
GTGTTTGGAG CCAATCCGCA GGACACCCTC AACGCCGTCA ACGGGGCGCA GCAACCCGCC
GCCCAGGAAG GCGTGCGCGG CCAGGTCAGC GACGAGGCGG GCCGCTTCGT CGACGTGATC
GAAACCTCCA ACACCGACGT CTGGGGTCCG CTCCTGGCGA AACACGACGT AAGATACCGG
CCGCCCGAGG CGGTGGTGCT CTACGACCAG GCCACCGGCA CCGGCTGCGG CACGGGCCAA
TCGGCGATGG GGCCGTTCTA TTGCCCCGCC GACCACAAGG TTTACCTGGA CCTCAGCTTC
TGGAACGAGC TCGAGACCCG GTTCGGAGCC AAGGGCGAGT TTGCCCGCGC CTATGTGATC
AGCCACGAGA TCGGCCACCA CATTCAGAGC CTGACCGGGG CCTCCGATCA GGCCCAGCGT
ATGGGGGCGC GCGGGGCGAC CAGCGGCTCG GTGCGGCTGG AACTGCAGGC CGACTGCTAT
GCCGGGGTTT GGGCGCGCCA TGCGCCCGAG GCGTCGGGCG GGGGCATCCA GATCAGCCGC
GCCGACATCG AGGACGGCCT GGGCGCCGCC TCGGCGGTCG GCGACGACGC CATCCAGGAA
CAGTCCCAGG GCCGCGTCAT GCCCGACAGC TTCACCCACG GCACCTCGGC GCAACGCATG
CGCTGGTTCG GCAAGGGCTA CGACGCCGGC GATCCCGGAG CCTGCGACAC GTTCGGGGCG
CGGACGCTTT AG
|
|---|
| Protein sequence | MEWGGGRREG NIEDRRGLGG GVGLAGGGIG AVVLAVIGYF VFGANPQDTL NAVNGAQQPA
AQEGVRGQVS DEAGRFVDVI ETSNTDVWGP LLAKHDVRYR PPEAVVLYDQ ATGTGCGTGQ
SAMGPFYCPA DHKVYLDLSF WNELETRFGA KGEFARAYVI SHEIGHHIQS LTGASDQAQR
MGARGATSGS VRLELQADCY AGVWARHAPE ASGGGIQISR ADIEDGLGAA SAVGDDAIQE
QSQGRVMPDS FTHGTSAQRM RWFGKGYDAG DPGACDTFGA RTL
|
|---|
| |