Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3104 |
Symbol | |
ID | 5900559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3370381 |
End bp | 3371121 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641563607 |
Product | hypothetical protein |
Protein accession | YP_001684729 |
Protein GI | 167647066 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0665725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.469934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACC CCGAGCCCAG CCCAAACACC GATCCGGACA CCGATCTCGA CGCCCTTGTC CGCCGGGTCG ATCCGGATCG CTGGCTGGCC AGCCGGTTCA TCGCCGACCC CAGGGGCCGG GCCGACGTCA TCGCGCTCTA CGCCTTCAAC TACGAGCTGG CCCGGGTGGC TGGCGGGGTC AGCAACGCCC TGATGGGCGA GATCCGCCTG ACCTGGTGGC GCGAGGCCAT GGAGGAGATC GCCGCCGGCC AGCCGCCGCG CAAGCATCCC ACGGTCGAGG CCGTCGCCGC GGCGGGCTAT CCGCTGGCCG CCTTGGCCGA GATGGCGCAG GCCCGCATCG CCGACCTGGA CACCGCGCCG TTCGAGACCG AAGCCCAGGT CCTGGCCTAT GTCGACGCCA CGGCCGGGGC GGTGATGATG CTGGCCGCCT GGCGGCTGGA CCCCGCCGCC GACCCGCACG CGGTCAAGAA CGCGGCCCGG GCCTATGGCT TGGCGGGCCT GTGGCGATTG AAGCGGGCGG GGGTCCAGCG CCTGCCGGCC GACTGGACCC AGGCCGATGT CCGCCGCCGC GTGCGCGCGG CGCGGGTCAA GGCGCGGGGC GAGCTGAAGG GCCTGCCGAT CGCCGCCTTC CCCGCCGCCG CGCCCGCCGC CCTGGCGATG GCGCAGACCG GTGCGCGGGA GCTTGGCGAA CTGGAGACCC GCACCCGGCT GACCTGGGCT GTGGCGACGG GACGGATCTA A
|
Protein sequence | MTNPEPSPNT DPDTDLDALV RRVDPDRWLA SRFIADPRGR ADVIALYAFN YELARVAGGV SNALMGEIRL TWWREAMEEI AAGQPPRKHP TVEAVAAAGY PLAALAEMAQ ARIADLDTAP FETEAQVLAY VDATAGAVMM LAAWRLDPAA DPHAVKNAAR AYGLAGLWRL KRAGVQRLPA DWTQADVRRR VRAARVKARG ELKGLPIAAF PAAAPAALAM AQTGARELGE LETRTRLTWA VATGRI
|
| |