Gene Caul_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3104 
Symbol 
ID5900559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3370381 
End bp3371121 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content74% 
IMG OID641563607 
Producthypothetical protein 
Protein accessionYP_001684729 
Protein GI167647066 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0665725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.469934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC CCGAGCCCAG CCCAAACACC GATCCGGACA CCGATCTCGA CGCCCTTGTC 
CGCCGGGTCG ATCCGGATCG CTGGCTGGCC AGCCGGTTCA TCGCCGACCC CAGGGGCCGG
GCCGACGTCA TCGCGCTCTA CGCCTTCAAC TACGAGCTGG CCCGGGTGGC TGGCGGGGTC
AGCAACGCCC TGATGGGCGA GATCCGCCTG ACCTGGTGGC GCGAGGCCAT GGAGGAGATC
GCCGCCGGCC AGCCGCCGCG CAAGCATCCC ACGGTCGAGG CCGTCGCCGC GGCGGGCTAT
CCGCTGGCCG CCTTGGCCGA GATGGCGCAG GCCCGCATCG CCGACCTGGA CACCGCGCCG
TTCGAGACCG AAGCCCAGGT CCTGGCCTAT GTCGACGCCA CGGCCGGGGC GGTGATGATG
CTGGCCGCCT GGCGGCTGGA CCCCGCCGCC GACCCGCACG CGGTCAAGAA CGCGGCCCGG
GCCTATGGCT TGGCGGGCCT GTGGCGATTG AAGCGGGCGG GGGTCCAGCG CCTGCCGGCC
GACTGGACCC AGGCCGATGT CCGCCGCCGC GTGCGCGCGG CGCGGGTCAA GGCGCGGGGC
GAGCTGAAGG GCCTGCCGAT CGCCGCCTTC CCCGCCGCCG CGCCCGCCGC CCTGGCGATG
GCGCAGACCG GTGCGCGGGA GCTTGGCGAA CTGGAGACCC GCACCCGGCT GACCTGGGCT
GTGGCGACGG GACGGATCTA A
 
Protein sequence
MTNPEPSPNT DPDTDLDALV RRVDPDRWLA SRFIADPRGR ADVIALYAFN YELARVAGGV 
SNALMGEIRL TWWREAMEEI AAGQPPRKHP TVEAVAAAGY PLAALAEMAQ ARIADLDTAP
FETEAQVLAY VDATAGAVMM LAAWRLDPAA DPHAVKNAAR AYGLAGLWRL KRAGVQRLPA
DWTQADVRRR VRAARVKARG ELKGLPIAAF PAAAPAALAM AQTGARELGE LETRTRLTWA
VATGRI