Gene Caul_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2960 
Symbol 
ID5900415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3214742 
End bp3215791 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID641563457 
Productputrescine carbamoyltransferase 
Protein accessionYP_001684585 
Protein GI167646922 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.547173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCACT TCGTCGATAC GCAGGACTTC ACCAAGGCCG AGCTGATCTG GCTCATGGAC 
CTCATCGGTT TGCTGAAGAA GGCCGACCGC GAGCGCGCCC TACCGCCGCT CCTGGCTGGC
GCGTCCCTGG GCATGATCTT CGAAGAGCCA TCGACCCGCA CCCGCATCTC GTTCGAGGTG
GCGATGACCA AGCTGGGCGG ACACGCGCTG TACCTGAAGC CTGGAGAGAT CCATCTGGGC
GTGCGCGAAA GCCTCAAGGA CTCGGCCCGG GTGATCAGCC GCATGGTCGA TGCAATCGAG
GCGCGCACGC TCAAGCACGC CACCATCACC GAGCTGGCGC GCTACGCCAG CGTGCCGGTG
ATCAACGGCC TGACCGACTA TAACCATCCG ACCCAGGTGC TCTGCGACGT CTTCACCATG
CGCGAGCACC GGCCTCTTCA CAAACCTCTC GAAGCGATCA AGGTCGCCTT CATCGGCGAC
GCCACGAATG TCTGCTCCTC GCTGATGATG ATCTGCACCC AGATGGGCAT GGAGTTCGTT
CACTGCGCCC CGTCCCGCTA TCAGGCCCCC GAGGCCTGGC AGTCGATCGC CCGCGCCAAT
TGCGCCCAGT CCGGCGGCCG GTTCTCGGTG ACCGACCAGC CGGACTTGGC CGTCGCGGAC
GCCGACTTCA TCTACACAGA CCTTTGGTGG TGGGTGGGTC AGGAGGCGGA GATCCCCGAG
CGGGAAGCCG CCTTCATGCC GCGCTATCAG GTCAATGACG CCCTGCTGGC CAAGGCGCCG
CCGCACGCCA AGTTCATGCA TTGCCTGCCC GCCTCGCGCG GCGTCGAGGT CACCGACGCG
GTCATGGATG GTCCGCGCGC CATCATCTAC GACCAGGCGG AGAACCGGCT TCACGCCGAG
AAGGCCATCC TGGTCGCGTT CGTGCGGCCC CACCTCAAGA TCCCGTCCGC CCAGCGCTCG
GCCCGTCACG CTCACGCGAT CGGCGCCTTC CTGCAAGACC ATCAGTTGCA CGGCGCGGAC
ACGCCGATGG CCGCCGCGCA AGAGGATTGA
 
Protein sequence
MRHFVDTQDF TKAELIWLMD LIGLLKKADR ERALPPLLAG ASLGMIFEEP STRTRISFEV 
AMTKLGGHAL YLKPGEIHLG VRESLKDSAR VISRMVDAIE ARTLKHATIT ELARYASVPV
INGLTDYNHP TQVLCDVFTM REHRPLHKPL EAIKVAFIGD ATNVCSSLMM ICTQMGMEFV
HCAPSRYQAP EAWQSIARAN CAQSGGRFSV TDQPDLAVAD ADFIYTDLWW WVGQEAEIPE
REAAFMPRYQ VNDALLAKAP PHAKFMHCLP ASRGVEVTDA VMDGPRAIIY DQAENRLHAE
KAILVAFVRP HLKIPSAQRS ARHAHAIGAF LQDHQLHGAD TPMAAAQED