Gene Caul_2742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2742 
Symbol 
ID5900197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2977720 
End bp2978766 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content74% 
IMG OID641563234 
Productnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_001684367 
Protein GI167646704 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0957714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC TTTCCGCCAT CGCCGCGACC ATCGTTCCGG TCGACGCCGC GCTCGAGCCC 
CTGCTGCGCG CCTGCCTCGA CGCCAAGGCC AAGCCGACGG GGTCGTTGGG CCGGCTAGAG
GACCTGGCGG TGCGGATCGG CCTGATCCAG AACCGCCTGG ATCCGCGCAT CGACCGCACC
GACCTCTATG TGTTCGCTGG CGACCACGGC CTGACGGGCG AAGGCGTCTC GGCCTATCCA
TCCAGCGTCA CCGCCGCCAT GGTCGGCCTC TTCCTGTCCG GCCGCTCCAG CGTCAGCGCC
CTGGCCAAGG CCACGGGCGT GAGAGTCCGG GTGGTCGACG CCGGGGTCGA CGCCGACCTG
CCCGACCATC CGGATTTGGT CGCCGCCAAG ATCCGGCGCG GAACCCGCAA CGCCGCCCGC
GAACCGGCCC TGACCCAGGA CGAGATCCTG CGCGCCATCG CCAAGGGCTA CGACATCGCG
CAGGCGGCGG CGGCCGATGG AGCGGACGTG GTCGCCCTGG GCGAGATGGG TATCGGCAAC
AGCTCGTCCG CCGCCCTGAT CATGCATCGC CTGGCGCCCG CGCCGCTCGA CGACTGCGTC
GGCCAAGGGA CGGGTCACGG CGCCGCGGGC ATGGCCCGCA AGCGCGCCGG CATCACCCGC
GCCGCCCAGC GTTCAGACGC CGTCCTGCCG CTGGCCGTGC TGGCCGAGTT CGGCGGCTGC
GAGATCGCGA TGATGGCGGG CGCCGTGCTC GGCGCGGCGT CGATGCGGCG CGTGGCGTTG
ATCGACGGCT TTATCAGCAC GGCGGCGGCC CTGGCGGCGG CGCGGCTGGT TCCGGCGGCC
CTCGACTACT GCGTCTTCGC CCACGGCTCG GCCGAGCAGG GGCACCCGAT CATGCTCCGG
GTCCTGGGCG TCCGCCCCCT GCTAGATCTG GACCTGCGGC TGGGCGAAGG CACGGGCGCC
GCCCTGGCCG CGCCGCTGCT GGTCGCCGCC GCCAACCTGC TGACCGACGT CGCCGACCTG
GCGGACGTCC TGGCGGGCCC CGCCTGA
 
Protein sequence
MTVLSAIAAT IVPVDAALEP LLRACLDAKA KPTGSLGRLE DLAVRIGLIQ NRLDPRIDRT 
DLYVFAGDHG LTGEGVSAYP SSVTAAMVGL FLSGRSSVSA LAKATGVRVR VVDAGVDADL
PDHPDLVAAK IRRGTRNAAR EPALTQDEIL RAIAKGYDIA QAAAADGADV VALGEMGIGN
SSSAALIMHR LAPAPLDDCV GQGTGHGAAG MARKRAGITR AAQRSDAVLP LAVLAEFGGC
EIAMMAGAVL GAASMRRVAL IDGFISTAAA LAAARLVPAA LDYCVFAHGS AEQGHPIMLR
VLGVRPLLDL DLRLGEGTGA ALAAPLLVAA ANLLTDVADL ADVLAGPA