Gene Caul_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2482 
Symbol 
ID5899937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2698770 
End bp2699339 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID641562973 
Product2'-5' RNA ligase 
Protein accessionYP_001684107 
Protein GI167646444 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.097083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACC AGCTTTCCCT CTTCGCGGCG CCGCCGGTCA CCGATCGGCT GTTCTTCGCG 
ATCTTTCCCG ATCCGGCGAC CGCCGCCGGG ATCGCCCATC GCGCCGCCCA GCTTCGCGCC
GCCCACGCGC TGAGCGGGCG GCCCCTGGCG CCAGAACGTT TTCACGTCAC GCTCCATCAT
CTTGGCGACC ATGCGGGTGT TCGGCGCGAC ATCGTGGCGA TGGCCAGCGA GGCGGCGGAG
ATGATCGCCA CACCAGCCTT CGACGTCACG TTCGATCGCG CGGCCAGCTT CCACAACGGT
GGCAATAATC CTCATGTCCT GCAGGGCGGC GAGGGCCTTG ACGCCCTGAA GGCTTTCCAG
CGAGACTTGG GCCTGGCGAT GGCGCGGGCC GGGCTAGGCC GGCTCGCGGA CAAGAGCTTC
ACCCCGCATG TGACGATGCT CTACGATCCT CGGTTGGTCG CCGAGCAGGC CGTCGCGCCG
GTGACCTGGC GGGTCGCCGG CTTCACGCTC GTCCACAGCC TGCTTGGAAG AACCGAGCAT
GTGCCGCTGC AGCGCTGGGC GCTGCGCTGA
 
Protein sequence
MSDQLSLFAA PPVTDRLFFA IFPDPATAAG IAHRAAQLRA AHALSGRPLA PERFHVTLHH 
LGDHAGVRRD IVAMASEAAE MIATPAFDVT FDRAASFHNG GNNPHVLQGG EGLDALKAFQ
RDLGLAMARA GLGRLADKSF TPHVTMLYDP RLVAEQAVAP VTWRVAGFTL VHSLLGRTEH
VPLQRWALR