Gene Caul_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2324 
Symbol 
ID5899779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2523227 
End bp2526376 
Gene Length3150 bp 
Protein Length1049 aa 
Translation table11 
GC content68% 
IMG OID641562815 
ProductCzcA family heavy metal efflux protein 
Protein accessionYP_001683949 
Protein GI167646286 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG CCGTCATCCG CTGGTCCCTG GCCAATCGCT TCTTCGTGCT GCTCGGCGCC 
CTGGCGCTGC TGGCCGGCGG GCTCGTGGCG CTGCGCGAAA CCCCGCTCGA CGCCCTGCCT
GATCTCTCCG ACGTGCAGGT GGTGATCCGC ACGCCGGCAC AGGGCCAAGC CCCGCGCCTG
GTCGAGGACC AGATCACCTA CCCCCTGGCC ACCACCATGT TGTCGGTGCC AGGCGCAAAG
ACCGTGCGCG GCTATTCCTT CTTCGGCGAC AGCTTCGTCT ATGTGCTGTT CGCCGACGGG
ACCGACCCCT ATTGGGCCCG TTCGCGCGTG CTGGAGTCGC TGAGCCAGGT GCAAAGCCGG
CTCCCGGCCG GAGCCCGACC GGCCCTGGGT CCTGACGCCA CCGGCGTCGG CTGGATCTTC
GAATACGCCC TGGTCGATCG CACCGGCCGC CATGACCTCA GCCAGCTGCG ATCCTTGCAG
GACTGGTTCG TGCGCTATGA GCTCAAGACT CTGCCGGGCG TGGCCGAGGT GGCCAGTATC
GGCGGCATGG TGCGCCAGTA CCAGGTGGTG CTCGACCCGC AGAAGCTGGC GGCCTACGGG
GTCACCCACC AGGCCGTGGT CGAGGCGCTG AACCGGGCCA ACCAAGAGGC CGGCGGCTCC
GTCGTCGAGA TGGCCGAGGC CGAATACATG GTTCGGGCCA GCGGCTATCT GAGCAGCCTG
GACGACTTCG CCGCCGTACC GGTCAAGACC GCCGCCGGCG GCGTGCCGAT CGCCCTGGGT
CAGGTCGCCA CGATCCAGAT CGGACCGGAG ATGCGCCGAG GGGTCGCCGA ACTCAATGGT
CAGGGCGAGG TTACCGGCGG CGTGGTCGTT CTGCGCTCGG GCGAGGACGC GCGCGCCACG
CTCAAGGCCG TGCAGGACAA GCTGAAAACG CTCAAGGCCA GCCTTCCGCC CGGGGTGGAG
ATCGTCACCA CCTATGACCG TTCGGGTCTG ATCGACCGCG CTATCGACAA CCTAAAGTCC
AAGCTCATTG AGGAGTTCAT CGTCGTCGCC CTGGTCTGCG CGCTCTTCCT TTGGCATCTG
CGCTCGGCCC TGGTGGCGAT CATCGCCCTG CCGCTGGGCG TGCTGGCCGC CTTCATCGTC
ATGCGGGCCC AAGGGGTCAA CGCCAACATC ATGTCGCTGG GCGGCATCGC CATCGCCGTC
GGGGCCATGG TCGATGCGGC CGTGGTGATG ATCGAAAACG CCCACAAGCA TCTGGAGCGC
TGGACGCACG ACCATCCCGG CCAAACGATC GGGACACAGG AGCGCTGGGA CGAGATCGCG
ACCGCCGCTG TCGAGGTCGG CCCGGCCCTG TTCCTGAGCC TGCTGATCAT CACCTTCTCG
TTCATCCCGG TCTTCACCCT GCAGGGCCAG GAGGGGCGGC TGTTCGCGCC GCTGGCCTTC
ACCAAGACCT ATGCCATGGC GGCCGCGGCT CTGCTGTCGA TCACCCTGAT CCCAGTGCTA
ATGGGCTATC TGATCCGCGG CAGGATCCCG GCCGAGACCG CCAATCCGAT CAATCGGGCG
CTGAGCGCGC TCTACGCCCC GGCCCTGGAC TGGGTGCTTG GGCGTCCGCG CACCACGCTG
GTCATCGCCG CCCTGGTCTT CGCCACCACC CTGGTCCCGC TGTCGCGGCT GGGCGGCGAG
TTCATGCCGA CGCTGAATGA AGGTGATCTG CTCTATATGC CGTCGGCCCT GCCGGGCCTG
TCGGCGGCCA AGGCCAGCGC GTTGCTCCAG CAGACCGATC GGCTGATCAA GACCGTGCCC
GAGGTCGACA GCGTGTTCGG CAAGGCCGGC CGCGCGGAGT CGGCGACCGA TCCGGCCCCG
CTGGAGATGT TCGAGACCAC CATCCGCTTC AAGCCGCGCG ATCAATGGCG CCCCGGCATG
ACCCCGGAAA AGCTGGTCGA GGAACTGGAC CGCACGGTGG CGGTTCCGGG CCTCTCCAAC
GTCTGGGTGC CGCCGATCCG CAACCGCATC GACATGCTGG CCACCGGCAT CAAGAGCCCG
ATCGGGGTCA AGGTGTCGGG CGCGGATCTC GCCCAGCTCG ACCGCGTCGC CCAGCAGATC
GCCCAGGTCG CCAAGACCGT GCCGGGCGTC AGCTCGGCCC TGGCCGAGCG GCTGGCAGGC
GGGCGGTATG TCGATGTCCG CATCGACCGG GCCGCCGCCG GCCGCTACGG CCTCAACATC
GCCGACGTCC AGGCTATCGT CTCGGGCGCG ATCGGCGGCC AGACGGTCGG CGAGACCGTC
GAGGGCCTGG CCCGCTATCC GATCAGCGTG CGCTATCCGC GCGAGGTGCG CGGCGATCTT
GAGGCCCTGC GGGCGCTGCC GATCCTCACC CCGTCCCTGC AGCAGATCAC CCTGGGCACC
GTGGCCAAGG TGGTGGTCAA CGAAGGGCCG CCGATGCTCA AAAGCGAGAA CGGTCGGCCG
ACCACCTTCG TCTATGTCGA CGTGCGCGGC CGCGACCTGT CTTCGGTGGT CGCCGATCTG
CAGCGGGCGG TGGCCAAGGA CGTCAGACCG GTCGCCGGCG TGACCATCAG CTATTCCGGA
CAGTTCGAAT ATCTGCAGCG CGCGGTCGAG CGCTTGAAGA TCGTCGTACC GGCGACGCTG
CTGATCATCT TCGTGCTGCT GTACCTGACC TTCCGCCGCT TCGACGAGGC GGCCCTGATC
ATGGGCGCCC TGCCCTTCGC CCTGACCGGC GGTTTCTGGG CGCTCTATCT GCTGGGCTTC
AACCAGTCGG TGGCCACCGG GGTCGGCTTT ATCGCCCTGG CCGGGGTCTC GGCCGAGTTC
GGGGTGGTGA TGCTGATCTA TCTCAAGCAG GCCTTGGCCG AGCGCCAGGG TGTTCTGAGC
GACGCCGACC TCAGCCAAGC GATCCGCGAG GGCGCCTTGT TGCGGGTCAG GCCCAAGGCC
ATGACCGTGG CGGTGATCCT GGCCGGTTTG ATGCCGATCC TCATCGGCCA CGGCGCCGGC
TCGGAAGTGA TGAGCCGGAT CGCCGCGCCA ATGATCGGCG GCATGCTCAG CGCGCCGCTG
CTGTCGATGT TCGTGGTGCC GGCCGCCTAT CTGCTCATCG AACGTCGGCG TCTTAGTCGA
CCTCGCGGCC CCACCATTGC TCACGGATAG
 
Protein sequence
MIAAVIRWSL ANRFFVLLGA LALLAGGLVA LRETPLDALP DLSDVQVVIR TPAQGQAPRL 
VEDQITYPLA TTMLSVPGAK TVRGYSFFGD SFVYVLFADG TDPYWARSRV LESLSQVQSR
LPAGARPALG PDATGVGWIF EYALVDRTGR HDLSQLRSLQ DWFVRYELKT LPGVAEVASI
GGMVRQYQVV LDPQKLAAYG VTHQAVVEAL NRANQEAGGS VVEMAEAEYM VRASGYLSSL
DDFAAVPVKT AAGGVPIALG QVATIQIGPE MRRGVAELNG QGEVTGGVVV LRSGEDARAT
LKAVQDKLKT LKASLPPGVE IVTTYDRSGL IDRAIDNLKS KLIEEFIVVA LVCALFLWHL
RSALVAIIAL PLGVLAAFIV MRAQGVNANI MSLGGIAIAV GAMVDAAVVM IENAHKHLER
WTHDHPGQTI GTQERWDEIA TAAVEVGPAL FLSLLIITFS FIPVFTLQGQ EGRLFAPLAF
TKTYAMAAAA LLSITLIPVL MGYLIRGRIP AETANPINRA LSALYAPALD WVLGRPRTTL
VIAALVFATT LVPLSRLGGE FMPTLNEGDL LYMPSALPGL SAAKASALLQ QTDRLIKTVP
EVDSVFGKAG RAESATDPAP LEMFETTIRF KPRDQWRPGM TPEKLVEELD RTVAVPGLSN
VWVPPIRNRI DMLATGIKSP IGVKVSGADL AQLDRVAQQI AQVAKTVPGV SSALAERLAG
GRYVDVRIDR AAAGRYGLNI ADVQAIVSGA IGGQTVGETV EGLARYPISV RYPREVRGDL
EALRALPILT PSLQQITLGT VAKVVVNEGP PMLKSENGRP TTFVYVDVRG RDLSSVVADL
QRAVAKDVRP VAGVTISYSG QFEYLQRAVE RLKIVVPATL LIIFVLLYLT FRRFDEAALI
MGALPFALTG GFWALYLLGF NQSVATGVGF IALAGVSAEF GVVMLIYLKQ ALAERQGVLS
DADLSQAIRE GALLRVRPKA MTVAVILAGL MPILIGHGAG SEVMSRIAAP MIGGMLSAPL
LSMFVVPAAY LLIERRRLSR PRGPTIAHG