Gene Caul_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2275 
Symbol 
ID5899730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2473343 
End bp2474143 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID641562766 
ProductP-type conjugative transfer protein TrbG 
Protein accessionYP_001683900 
Protein GI167646237 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02775] P-type conjugative transfer protein TrbG 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.210021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGG CGATCGTCGC GATCGCATTG GCCGGGTTTG TGACCCCCGC GGCCGGCTTG 
GCGTCTCCGC CCCGCAAGGC TGCCGAACGG CCGGTGGAGG CGGTGGCGGC CACCGAATAT
CTCTTCGCCG AGCGCGGCGT GTTCGAACTT CTCGCCGCGC CGGGCTGGAT CACCGACATC
GTGTTGGAGC CCGGGGAGAC TCTGGTCGAG ACCAATCCGA TCGCCGCCGG CGACACCGTC
CGTTGGATCA TCGGCGACAA TGCGAGCGGG GAGGGCGCGA GCCGCCGGGT CCACGTCCTG
GTCAAGCCGG CGACGGCGGG TCTGTCGACC AACCTGATCA TCAACACCAA CCGGCGCAGC
TATCACCTGC GGATGCGCGC CTCGCCGCGC GCCTATCTCT CGCAGGTGGC TTGGCGCTAT
CCGCCGGCGG CGAACGTGGG GCCGACGATC CCAGTCAGGC CGGCGGACCT TGCGCCGCCG
CCTGTTCCGC CTGCGCCAGC GCACATCAAC CTCGGCTATC GGATCAAGGG AGCGGCGCGC
TGGCGACCAG AGCGCGCCTA TGACGACGGC GCGCGGACCT TTGTCGAGTT TGGCCGCGCC
ATCGCGCTGT CGGACATGCC GCCGCTCTAT GTCCTCGGCG TCGACGGCAA GACCTCGGAG
CTGGTCAACT ATCGCGTCGA TGGCCGCCGG CTGGTGGTTG ATCGCCTGTT CGACCGGGCC
GAGCTGCGTT TTGGCCTCAG GCGGTGGGAG CGGCGCGTCC GGATCGAGCG AACGACGCCG
CCACAGGAGG TCGGCCAATG A
 
Protein sequence
MTRAIVAIAL AGFVTPAAGL ASPPRKAAER PVEAVAATEY LFAERGVFEL LAAPGWITDI 
VLEPGETLVE TNPIAAGDTV RWIIGDNASG EGASRRVHVL VKPATAGLST NLIINTNRRS
YHLRMRASPR AYLSQVAWRY PPAANVGPTI PVRPADLAPP PVPPAPAHIN LGYRIKGAAR
WRPERAYDDG ARTFVEFGRA IALSDMPPLY VLGVDGKTSE LVNYRVDGRR LVVDRLFDRA
ELRFGLRRWE RRVRIERTTP PQEVGQ