Gene Caul_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2245 
Symbol 
ID5899700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2441739 
End bp2442242 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID641562736 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683870 
Protein GI167646207 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.487032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGCT TCTTCCCTCC TGCGCCCCCG CGCTCGGAGC TCTCGCTCGC CGTTGAGTCG 
CTGTGCCGGC GCTACGACAC GTGGTTTCGC GGCGTGCTGC GCCGGCGTTA CGGCGACCAG
GCCGACGACC TCGCGCAAGA GGCTTATCTG CGCACGGCCG CCCACGAGGC CGGGGGCAAG
GTCCGGCACC CAAAGGCTTT CCTTCTCAAC GTCGCCAACA ACCTGGCGAC GGACCGGCGG
CGACGCGAAC TTCGCGAAAA CGCCTACGCC AGCTACCGCG GCGCGTTCCC GACGCAATCG
ACAGCGGCAA CGCAGGAGAT GGCGGTAACC TTGAAGCAGA TCATGCTGGC CCTACCGCCA
GAGTTGCGCG ATTGTTTGAT CATGAGCCGC GTCCACGGCC AGACGCACGG GGAGATCGCG
TTGCAGCTCG GACTGACCCA GCGCACTGTG AAGGACCGGG TGCGACGAGC CTCGATCTTG
GTTGCCGCAG CCATGCAGGA CTAA
 
Protein sequence
MDGFFPPAPP RSELSLAVES LCRRYDTWFR GVLRRRYGDQ ADDLAQEAYL RTAAHEAGGK 
VRHPKAFLLN VANNLATDRR RRELRENAYA SYRGAFPTQS TAATQEMAVT LKQIMLALPP
ELRDCLIMSR VHGQTHGEIA LQLGLTQRTV KDRVRRASIL VAAAMQD