Gene Caul_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2047 
Symbol 
ID5899502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2186568 
End bp2187446 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content74% 
IMG OID641562536 
Productnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_001683673 
Protein GI167646010 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0519464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT CTCCATTCGA CGACATCCGC AAGCTGGCCG CCGACGCGCC GGCTGCTCCG 
ACCTGGACCT TCGAAGGCGG TGATCGCCTG GCCGAGATCT CGGCGTGGCT GACCGCCTGG
ACCAGCAAGA CCCCGCCGGT CGTGCTGCGC CCGGTTGTCG CTCTCTATGC CGGCGCTCGC
CAGGGCGTGG GGCCGCGTGG CTACGCCCGC GAGCGCCTGG AAGCCGTGGC GGCGGGCGGA
GCCAATGTCT GCCGTATCGC TGGAGCCCAA GGGGCGGGGC TGGAAGCCTT CGACCTGGCC
ATCGACCGCC CGACGCCCGA CGCGGTCGAC AGGGCCGCGA TGAGCGAGAA GGAATGCGCG
GCGACCATGG CCTTCGGCAT GGAGGCCCTG GCCAAGCAGC CGGACCTGCT GATCCCCGGC
GCGATCGTCG CCGAAGCCGA GCGTGCCGCC GGCGCCATCG CCCTGGCCCT GTTCGGCGGC
GAGGCCGGCG ACTGGAGCGC GGCGCCCGCG CCGATCGCCG CCGCCGTGGC GCGCGCCGCA
AGCGAGGGCG ACCTTTCCGA TCCGCTTCAG GCTCTGCGCC AACTGGGCGG GCGCGAGACC
GCCGCCCTGG TCGGGGCGAT CCTGGCCGCC CGGGTTCAGA AGGTCCCCGT GCTGCTCGAC
GGCTATGCCG CCTGCGCCGC CGCCGCCGTG CTGCATGCGC TAGATCCCGC CCTGATCGCC
CACTGCCAGG CCGGCCACGT CGGGACCGCC AAGGGCCACG CGCGCCTGCT GGAGACCTTG
GGCAAGCGAC CGCTGATCGA CCTGGACATC GCCGAGGAAG AGGGTGTCGG CGGGGCTGCC
GCCCTGGCGC TGGTGCGACT GGCCTGCGAG GTCCGGTAG
 
Protein sequence
MTASPFDDIR KLAADAPAAP TWTFEGGDRL AEISAWLTAW TSKTPPVVLR PVVALYAGAR 
QGVGPRGYAR ERLEAVAAGG ANVCRIAGAQ GAGLEAFDLA IDRPTPDAVD RAAMSEKECA
ATMAFGMEAL AKQPDLLIPG AIVAEAERAA GAIALALFGG EAGDWSAAPA PIAAAVARAA
SEGDLSDPLQ ALRQLGGRET AALVGAILAA RVQKVPVLLD GYAACAAAAV LHALDPALIA
HCQAGHVGTA KGHARLLETL GKRPLIDLDI AEEEGVGGAA ALALVRLACE VR