Gene Caul_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1900 
Symbol 
ID5899355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2038703 
End bp2039224 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID641562390 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001683527 
Protein GI167645864 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.429889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG TCGCCCCCCT GCCCCTCGAG GGCCTGTCCG ATCCGCTTCG CGCCTCGATC 
GATCGGGGCA CGGCGACGCG GATGCTATCC AACACCCTGC CCGTGCAGAT CTGGGCGCAT
CGACCGGCCG CGGCCAATGC CTGGCTGGGC GTGATGGCCG AGATCCACGA ACGTGGCGTG
CTGCCGGACC GGCTGCGGGA ACTGGTGCGG CTCAAGATCG CCTCGATCAC AACCTGCCCG
GTGTGCCAGG TCGCCCGCAA GTCCGACGAG GTCAGCGAGG CTGACATCGT CGCTTGCAGC
GACTGGTCCG ATGCGCGCTT CAGCCCGCCC GAACAGGCCG CCCTGCGGTT CGCCGAACTG
TTCGCCGGCG ACTATTTCTC GCTGGGCGAA GAGATCTACG ACCATCTGCG CGAGCATTTC
AGCGAAGCGG AGATCGTCGA GCTCCACCTC TTCAGCGGCC TGATGCTGGC CGGGGGTCGC
ATGACCTATG TGCTGAAGGG CTATGAGGAC ACCCCCGCTT GA
 
Protein sequence
MARVAPLPLE GLSDPLRASI DRGTATRMLS NTLPVQIWAH RPAAANAWLG VMAEIHERGV 
LPDRLRELVR LKIASITTCP VCQVARKSDE VSEADIVACS DWSDARFSPP EQAALRFAEL
FAGDYFSLGE EIYDHLREHF SEAEIVELHL FSGLMLAGGR MTYVLKGYED TPA