Gene Caul_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1709 
Symbol 
ID5899164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1798888 
End bp1800111 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content72% 
IMG OID641562199 
ProductABC-2 type transporter 
Protein accessionYP_001683336 
Protein GI167645673 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0615816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.147772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG AGGCCGTGAG CACGCGCCTG TCGATGATCG CCGCCATGCT GCGGGTGATG 
AGCCTGGAGC TGTGGCGCGA CCGCGGCGCC CTGGTCATGA CCTTCCTGCT GCCGCCCCTG
GTCTTCCTGA TCTTCTCGTC GGTGTTCGCC GGCGCGACGG GCGAGAACAT CCAGCTGAAG
CTGGCGGTGG CCGACGTGGC CAGGACCCAG GCGTCGGCTC GCTTGACGGC GGCCTTGCTG
AAGTCGCCCG ACGTGCGCGC CGAAGCCGTT TCGCCGGCCA CGGCCCAGGA GGTGCGCCGC
AGGGTCAAGG CTGGCTTGGC CGACGCCGGC TTGGTGATCC GCGCCGATCC GGGCGTCACC
GGCCAGCCGT TCCTGGTCGT CGCCGATTCC AGCCGGGCGG TCGCCGCGCC CCTGACCCAG
GCGCGGGTCC AGCAGGTGTT CAACGCCGCC CTGCCGGACG TCGCCCTGCG CCGCACTGTC
GAGCAACTGG CCCCCGCCCT GGGCGAGCTG ACGCCCGACC AGGAAGAGAA CCTCGACACG
GCCGCCGCCA TCCTGCGGGA CGATCCGCCC AAGACCGACG TCGGCCTGTT CGTTCGCGAG
GAGGTCAAGG ACGCCCGGAC CGGCGGCGGG GTGATCGCCT ACTACGCCGG CGCGGTGATG
ATCCTGTTCG CCCTGTTCTC GGCCATGCAG GGCGCCCTGG GGCTGGTGGA GGAGCGGCGG
ACCGGCGTCG CCGACCGCCT GATGGCCGGA ACGGCCGGCA TGGGGCCGGT GGTGACCGGC
AAGTTCCTGT TTCTGGTCGG GCAGGGGCTG GTCCAGGCCC TGGCGATCTT CGCCACCGCC
CAGGTCGTCT ACGGCGTGGC GGTGGTCCAG CACGCGGCCC TGTGGCTGCC GACCACCCTG
GCGGCCAGCG CCTGCGCGGC GGGGCTGGCC CTGGGGTTGG TCTCGGTCTG CCGTACGCGC
GAACAGGCCC AGATGCTGTC GACCTTCGTG ATCCTGGTGC TGGCGGCGAT CGGCGGCAGC
ATGGCGCCGC GTTTCCTGAT GCCGCCCTGG CTTCAGCAGA TAGGCTGGTT CACACCGCAC
GCCTGGGCCA TCGAGGCCTA TCAGGCCATC CTCTGGCGCG ACGCCGGGAT CGGCGCGGTG
TATAAGGCTT GGAGCGTGCT GACCGCCACG GGCCTCGTCG GCCTGGCCGT GGCGCACGTG
TCGTCGCGTC GGCTTCGCCG ATAG
 
Protein sequence
MSIEAVSTRL SMIAAMLRVM SLELWRDRGA LVMTFLLPPL VFLIFSSVFA GATGENIQLK 
LAVADVARTQ ASARLTAALL KSPDVRAEAV SPATAQEVRR RVKAGLADAG LVIRADPGVT
GQPFLVVADS SRAVAAPLTQ ARVQQVFNAA LPDVALRRTV EQLAPALGEL TPDQEENLDT
AAAILRDDPP KTDVGLFVRE EVKDARTGGG VIAYYAGAVM ILFALFSAMQ GALGLVEERR
TGVADRLMAG TAGMGPVVTG KFLFLVGQGL VQALAIFATA QVVYGVAVVQ HAALWLPTTL
AASACAAGLA LGLVSVCRTR EQAQMLSTFV ILVLAAIGGS MAPRFLMPPW LQQIGWFTPH
AWAIEAYQAI LWRDAGIGAV YKAWSVLTAT GLVGLAVAHV SSRRLRR