| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1520 |
|---|
| Symbol | gatA |
|---|
| ID | 5898975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1612106 |
|---|
| End bp | 1613578 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641562007 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_001683148 |
|---|
| Protein GI | 167645485 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.361745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCGC TGACCTCTCT GACCCTGAAG GGCGCGCTGG ACGGCCTGGA GAAGGGCGAC
TTCACCTCGG TCGAGCTGAC CCGCGCCCAT ATCGACGCCA TCGAGGCCGC GCGCGGCCTG
AACGCCTTCC TGCTGGAAAC GCCCGAACAG GCGCTGTCGA TGGCCGCCGC CTCCGACGCC
CGGCGTGCGC TTGACGCCGC CCGGCCGCTG GATGGGATTC CACTGGGGAT CAAGGACCTG
TTCTGCACCC AGGGCGTGCG GACCACGGCC GCCTCGAAGA TCCTCGAGCC GTTCGTCCCG
CAATATGAGT CGACCGTCAC CAGCCAGCTG TGGCGCGACG GGGCGGTGAT GCTGGGCAAG
CTGAACCTCG ACGAGTTCGC CATGGGCTCG TCGAACGAAA CCAGCGCCTA CGGACCGGTG
GTCAATCCCT GGCGCAAGGC CGGCTCCAAC CAGGCCCTCA CCCCGGGCGG CAGCTCGGGC
GGCAGCGCCG CGGCCGTGGC CGCCGACCTG TGCCTGGGCG CCACCGCCAC CGACACCGGC
GGCTCGATCC GCCAGCCGGC CGCCTTCACC GGCACGGTCG GCATCAAGCC GACCTATGGC
CGCTGCTCGC GCTGGGGCGT CGTGGCCTTC GCCAGCTCGC TGGACCAGGC CGGCCCGATC
GCCAAGACCG TCACCGACGC GGCCCTGCTG CTGACCTCGA TGAGCGGTCA CGATCCCAAG
GACTCGACCA GCCTCGACGT GCCGGTTCCC GACTTCTCGG CCTTCGTCGG CAAGTCGATC
AAGGGCCTGC GGATCGGCGT TCCCCAGGAA TACCGCGTCG ACGGCATGCC CGCCGAGATC
GAGAAGCTGT GGGCCGACGG GATCGCCTGG CTGAAGGACG CCGGCTGCGA GATCGTCGAG
ATCAGCCTGC CGCACACCAA GTACGCCCTG CCGGCCTATT ACATCGTGGC CCCGGCCGAG
GCGTCGTCGA ACCTGGCCCG CTACGACGGC ATGCGCTACG GCCTGCGGGC CGAGGGTTCG
AACCTCACCG AGGTCTACGA GAACACCCGC GCCGAGGGCT TCGGCGACGA GGTCAAGCGG
CGCATCCTGA TCGGCACCTA TGTGCTGTCG GCCGGCTATT ACGACGCCTA CTACCTGAAG
GCCCTGAAGG TGCGCCGCCG CATCGCCGAG GACTTCGACA ACGCCTGGGA ACGCTGCGAC
GCGATCCTGA CCCCGACGGC GCCGTCGGCG GCCTTCGGCC TGGGCGAGAA CTCGAGCGAT
CCGATCGCCA TGTACCTGAA CGACGTGTTC ACGGTGACCA CCAACCTGGC GGGCCTGCCG
GGCCTGTCCC TGCCGGCCGG CCTCGACGCC AACGGCCTGC CGCTGGGCCT GCAGATCATC
GGCAAGCCGC TGGACGAGGG CACGGTGTTC TCGGTGGCGG GCGTGCTGGA GAAGGCCGCC
GGCTTCACGG CAAAGGCGAC CAAGTGGTGG TAG
|
|---|
| Protein sequence | MSSLTSLTLK GALDGLEKGD FTSVELTRAH IDAIEAARGL NAFLLETPEQ ALSMAAASDA
RRALDAARPL DGIPLGIKDL FCTQGVRTTA ASKILEPFVP QYESTVTSQL WRDGAVMLGK
LNLDEFAMGS SNETSAYGPV VNPWRKAGSN QALTPGGSSG GSAAAVAADL CLGATATDTG
GSIRQPAAFT GTVGIKPTYG RCSRWGVVAF ASSLDQAGPI AKTVTDAALL LTSMSGHDPK
DSTSLDVPVP DFSAFVGKSI KGLRIGVPQE YRVDGMPAEI EKLWADGIAW LKDAGCEIVE
ISLPHTKYAL PAYYIVAPAE ASSNLARYDG MRYGLRAEGS NLTEVYENTR AEGFGDEVKR
RILIGTYVLS AGYYDAYYLK ALKVRRRIAE DFDNAWERCD AILTPTAPSA AFGLGENSSD
PIAMYLNDVF TVTTNLAGLP GLSLPAGLDA NGLPLGLQII GKPLDEGTVF SVAGVLEKAA
GFTAKATKWW
|
|---|
| |