Gene Caul_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1248 
Symbol 
ID5898703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1310321 
End bp1310701 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content71% 
IMG OID641561733 
Productmethylglyoxal synthase 
Protein accessionYP_001682876 
Protein GI167645213 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1803] Methylglyoxal synthase 
TIGRFAM ID[TIGR00160] methylglyoxal synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.10803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0156923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG ACGCCCCCCT CGCCATCGGC CTCGTGGCTC ACGACGACAA GAAGGCCGCG 
TTGGTGGACT GGGCGGTGGC GCACCGGGCG TTCCTGTCCC GGCATCGGCT CTACGCCACG
GGCACGACGG GCGGGCGGAT CCTGGAAGCC CTGCCGGATC TGGACCTCAC CCGGCTGAAG
AGCGGCCCGC TGGGCGGCGA CCAGCAACTG GGCGCGCTGC TGGCCGAGGG GCGGCTGGAC
ATGCTGGTGT TCTTCGTCGA CCCGCTGTCG CCGCAACCGC ACGACGTCGA CGTCAAGGCG
CTGATCCGCA TGGCGACCCT GGCCAACGTC CCGTTCGCTT GCAACCCAGC CACGGCCGAC
CTGATCGTGG CGGGACGCTG A
 
Protein sequence
MSADAPLAIG LVAHDDKKAA LVDWAVAHRA FLSRHRLYAT GTTGGRILEA LPDLDLTRLK 
SGPLGGDQQL GALLAEGRLD MLVFFVDPLS PQPHDVDVKA LIRMATLANV PFACNPATAD
LIVAGR