Gene Caul_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0875 
Symbol 
ID5898330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp929845 
End bp930714 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content74% 
IMG OID641561358 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001682504 
Protein GI167644841 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.290267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.166605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG GTTTCATCGG CCTGGGCGCC ATGGGCAAGG CCATGGTCGA GGCCCTGCTG 
GAGAAGGGCC ACGCCGTGAC GGTGTGGAAC CGCTCGCCGG GTCCGGCGGC CGAGCTGGCG
ACCCTGGGCG CCAGGGTGGC CGGGACGATC GACGAGACCC TGCGGGGCGA TATCGTGCTG
TCGATCCTGG CCCATGACCA GGCGATCCGC GACGTCCTGC TGGACGCCCT GCCGCGCGCC
CGGCCGGGCC TGACGCACGT CAACCTGGCC ACCATCTCGA CGGCTTTCGC GCGCGAACTG
GCCGACCGAC ACGCCGCGCT GGGCCTGGAA TATGTGGCGG CCCCGGTGTT TGGCCGTCCG
CCCGTGGCGC GGGCCGGCAG CCTGAACGTG CTGGCGGCCG GCGCGCCCGA GGCCGTGGCC
CGGGCCTTGC CGGTGCTGGA GGCCCTGGCC GTCAAGGTCT GGCCGATGGG CGAGGACCCC
GTCCGCGCCA ACGCGGTCAA GATCGCCGGC AACCTGATGA TCGTCTCGGC CGTCGAGGCC
ATGGGCGAGG CCGCCGCCCT GGGCGCGGCG CACGGCGTGC CGGCCGCCGA CCTGCTGGAC
ATGCTGACCA GCACCATCTT CGCCGCCCCG ATCTACAAGA CCTACGGCGC CATGATCGCG
CAGGGCCGCT ACCACCCGCC GGGCTTCGCC GCCGACCTGG CGCTCAAGGA CGTGCGGCTG
GCCCAGGCGG CGGGCGACGA GAAGGGCCTG GCCCTGCCGC TGGCCGACCT GGTGGAGAGC
GGTCTCGAAG CGCTGCTGGC GGGCGAGGGC GAAACCCCGG ACCTGGCCGC CTTGGCCGAG
GTGTCGCGCG GACGCGTGGA AGGGCGCTAA
 
Protein sequence
MDIGFIGLGA MGKAMVEALL EKGHAVTVWN RSPGPAAELA TLGARVAGTI DETLRGDIVL 
SILAHDQAIR DVLLDALPRA RPGLTHVNLA TISTAFAREL ADRHAALGLE YVAAPVFGRP
PVARAGSLNV LAAGAPEAVA RALPVLEALA VKVWPMGEDP VRANAVKIAG NLMIVSAVEA
MGEAAALGAA HGVPAADLLD MLTSTIFAAP IYKTYGAMIA QGRYHPPGFA ADLALKDVRL
AQAAGDEKGL ALPLADLVES GLEALLAGEG ETPDLAALAE VSRGRVEGR