Gene Caul_0750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0750 
Symbol 
ID5898204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp805704 
End bp806363 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID641561230 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_001682379 
Protein GI167644716 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.851867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT GCCGCCTCTA TCTGATCACC CCGCCGGCCC TCGACGACCT GGCCGCCTTC 
GGCCACGACC TGGCCGCGGC CCTGGACGGC GGCGACGTGG CCGCCCTGCA GATCCGCCTG
AAGGACGCCC CCGACGACAT CATCGCCGCC GCCGTCCAGG TCCTGTCGCC GATCGCCCGG
GCGCGCGACG TGGCGGTGAT CCTCAACGAC CGTCCGGACC TGGCCGCGCG ACTGGGCTGC
GACGGCGTGC ATCTGGGCCA GGACGACATG CCTCTCGCCC AGGCCCGCAA ACTGATGGGG
CCGGGCGCGA TGATCGGCGT CACCTGCCAC GACAGCCGCC ACCTGGCCAT GGAGGCCGCC
GAGGCCGGGG CCGACTACGT GGCCTTCGGG GCCTTCTTCC CGACCACCAC CAAGGACGCC
CCGACCACCG CCGATCCGGA GATCCTGTCG ATCTGGCAGG AGACCATGGA GATCCCGTCG
GTGGCGATCG GCGGCATCAC CGCCGACAAC GCCGCCGGCT TGGCCGCGGC GGGGGCCGAC
TTCCTGGCCG TCTCGGCCGG GGTCTGGAAG CACCCTCAGG GTCCCGCCGC CGGCGTCGCG
GCGATCAACG CGGCCATCGC CCAAGGGCTT GAGGCGCGCC TGGCGGCGCG CGGCGGATAA
 
Protein sequence
MTDCRLYLIT PPALDDLAAF GHDLAAALDG GDVAALQIRL KDAPDDIIAA AVQVLSPIAR 
ARDVAVILND RPDLAARLGC DGVHLGQDDM PLAQARKLMG PGAMIGVTCH DSRHLAMEAA
EAGADYVAFG AFFPTTTKDA PTTADPEILS IWQETMEIPS VAIGGITADN AAGLAAAGAD
FLAVSAGVWK HPQGPAAGVA AINAAIAQGL EARLAARGG