Gene Caul_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0688 
Symbol 
ID5898143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp751155 
End bp752012 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID641561170 
Productshort chain dehydrogenase 
Protein accessionYP_001682319 
Protein GI167644656 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.902774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC AGAACAAGAC CCTCTTCATC ACCGGCGCCT CGCGCGGCAT CGGCCTGGCC 
ATCGCCCTGC GCGCGGCGCG CGACGGGGCC AATATCGTCA TCGCCGCCAA GACCGCCGAG
GCACACCCCA AGCTGCCCGG CACCATCTAC ACCGCCGCCG CCGAGATCGA GGCGGCCGGC
GGCAAGGCCC TGCCGCTGGT GGTCGACGTG CGCGAGGAGG CCAGCGTCCA GTCGGCCGTC
GACAAGGCGG TCGAGACGTT CGGGGGCATC GACATCTGCG TGAACAACGC CTCGGCGATC
TCGCTGACCG GCACGCTGTC GACCGACATG AAGCGCTACG ACCTGATGCA CCAGATCAAC
GGCCGGGGCA CGTTCCTGAC CTCGAAGCTC TGCCTGCCGC ATCTGCGCAA GGCGGCCAAC
CCGCACATCC TGGCCCTGTC GCCGCCGCTG GACATCAAGC CCCGCTGGTT CGCGCCGCAC
GTCGCCTATT CGATGGCCAA GTACAATATG AGCCTGTGCA TGCTGGGCAT GGCCGAGGAG
TTTCGCGCTG ACGGCGTGGC CTGCAACGCC CTGTGGCCGC GCACCGCCAT CGCCACCGCC
GCCATCCAGT TCGCCCTGAC CGGTGAGGAG GGCCTCAAGC ACTGTCGCAC CGTCGAGATC
ATGGCCGACG CCGCCCACGC GATCTTCTGC AAGCCTTCGC GCGAGTTCAC CGGCCAGTTC
GTGATCGACG ATACGTTCCT GTATGGCGAG GGCGTGCGGG ATTTCGACCA GTACCGCGTC
GACCCGACCG CGACCCTGAT GCCCGACTTC TTCGTACCCG AGGACAGCGT CCCGCCGCCG
GGGGTGGTGA TCGGGTAA
 
Protein sequence
MSLQNKTLFI TGASRGIGLA IALRAARDGA NIVIAAKTAE AHPKLPGTIY TAAAEIEAAG 
GKALPLVVDV REEASVQSAV DKAVETFGGI DICVNNASAI SLTGTLSTDM KRYDLMHQIN
GRGTFLTSKL CLPHLRKAAN PHILALSPPL DIKPRWFAPH VAYSMAKYNM SLCMLGMAEE
FRADGVACNA LWPRTAIATA AIQFALTGEE GLKHCRTVEI MADAAHAIFC KPSREFTGQF
VIDDTFLYGE GVRDFDQYRV DPTATLMPDF FVPEDSVPPP GVVIG