| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0582 |
|---|
| Symbol | |
|---|
| ID | 5898037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 634781 |
|---|
| End bp | 636925 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641561064 |
|---|
| Product | dehydrogenase E1 component |
|---|
| Protein accession | YP_001682213 |
|---|
| Protein GI | 167644550 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.173012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCG CGACCGATTC CGCAGCCTGG GCAGTCGCCG ATCCCAAACT GCTCGACGCG
ATGCTGACCT CGATGGTGCT CATCCGCGCT TTTGAGGAGA AAGTGCTGGA ACTCGCCGGG
CACGGGCTTG TCCATGGCCC CGCGCATTCC GCGATCGGAC AGGAAGGGGG CGCGGTGGGC
TCGGTGCTCG CGATGCGCGG CTCCGATCAG ATTAACGGCT CGCACCGCGC CCATCACCAG
TTCCTGGCCA AGGCGCTGCA CTATGTAGCG CCGCAGGGCC TGAGGTCCTC GGATCCATTC
GACGACGATG TCCGCACGAT CGCCGATCGC GCGCTTTCGG AAATACTTGG ACTGGCGCGC
GGCTATTGTA AGGGCCGGGG CGGTTCCATG CACTTGCGCT GGGCGGAGTC GGGCAATCTG
GGCACCAATG CGATTGTCGG CGGCGGCGTG CCGGCGGCAG CGGGCGCGGC GTGGGCCCAC
AAGCGCGCGG GCGCGGGCGA CGTCGCCTTT ACCTATTTCG GCGACGGCGC CGTCAACATT
GGTTCGGTGC TGGAAACGAT GAACCTGGCG GCGGCATGGA AGCTGCCCCT GTGCTTCTTC
ATCGAGAATA ATCGCTACGC GGTGTCGACC ACCGTGGAGG AGGTTACGGC CGAGCCCAGG
CTATCGTCGC GGGGGTTGGC TTTCGGCATT CCCGCCTGGA AAGTCGATGG CATGGACCCC
CTGGCCGTCT ATCTCGCGAC GACAGCGGCG GTGGAAAAGA TGCGTGCGGG CGAAGGTCCG
ACCATCATCG AGGCCGACGT CTATCGCTAT TTCCATCAGA ACGGGCCGCT TCCGGGCAGC
GCCTTTGGAT ACCGGAGCAA GCGCGAAGAG GAGGCTTGGC GCAAACGCGA TCCAATCGAT
CGGATCGCTG CGGAGATGGC GTCTCGCCAA CTGATCGGGG AAGAGCAAGT GGCCTTGCTG
CGCGCGCAGG CAAGGACGCT GATGGAGGAG GTCGCGGCCG GGCTGGTCGA ACAGCATGAC
GGAAAGCGGC GCATTGTTCC GTCGCTGTGG CCGTCGCCCG ATTTTCGGGA TTTCGGCATA
CGCGGCGACC TGTCCGAACT GCGGGATGTT CGCTTTCTGG AGCAGGATGA TTTCCCTGGC
CAGATCGTCG AGAGCCGGTT CGTCGACGTC ATCGCCGATG TGATGGACCG GCGCATGCGG
GAAGACGAAA GCATCGTCGT GATGGGCGAG GATGTTCACC GTCTGAAGGG CGGAACCAAC
GGCGCCACGC GAGGATTGTC CGCCAGTTTT CCCGATCGCG TCTTGGCGAC GCCAATCGCC
GAGAACGCCT TTGTCGGTTT GGCGGGCGGC ATCGCCATGG ACGGCCGTTT CGCGCCGGTG
GTCGAGTTCA TGTATCCCGA TTTCATGTGG GTGGCCGCCG ACCAGGTTTT CAACCAGATT
GGCAAGGCGC GCCACATGTT CGGCGGTGAC GGGGAAGTGC CCCTTGTGCT GCGCACCAAG
GTGGCCATGG GCACCGGCTA CGGGTCTCAG CATTCCATGG ATCCGGCCGG CATCTTCGCC
ACGTCACCCG GCTGGCGGAT CGTCGCCCCA TCAACGCCCT ATGACTATGT GGGTCTGATG
AACAGCGCGC TGCGGTGCAA GGACCCGGTG TTGGTGCTCG AGCATGTCGA CCTTTACAAT
AGCAAAGGAC CCGCGCCCGT TGGGGATCTC GACTATTTCA TTCCGCTGGG CAAGGCCAAG
CTGCTGCGAA CCGGTCTGCG CCTGACCGTC CTGACCTATC TTGCCATGGT CCGGCCGGTC
TTGGATGCGG TCGAGCATTT AAACGTCGAT GCCGACGTGA TCGATCTTCG AAGTCTGGAT
CGTGCAGGCG TCGATTGGGC AATGATCGAG CAGTCGATCG AGAAGACTGG AAATGTCCTG
ATCGTCGAAC AGGGGGCCGC CGGGACCTCC TATGGCGGCT GGCTTGCCGC CGAAATCCAG
AACCGTTGCT TCGATATGCT CGATCAGCCG ATCCAGCGAG TGCACGGGGG CGAGGCGTCT
CCCAGCATCT CAAAGGTTCT GGAGACCGCG GCCTGTGCCG GCGCCAGCGA GATCGAGACC
GGTTTGCGGA TTGTGATGGC CGCCCAGGGC CGGGCTCTGG GCTGA
|
|---|
| Protein sequence | MALATDSAAW AVADPKLLDA MLTSMVLIRA FEEKVLELAG HGLVHGPAHS AIGQEGGAVG
SVLAMRGSDQ INGSHRAHHQ FLAKALHYVA PQGLRSSDPF DDDVRTIADR ALSEILGLAR
GYCKGRGGSM HLRWAESGNL GTNAIVGGGV PAAAGAAWAH KRAGAGDVAF TYFGDGAVNI
GSVLETMNLA AAWKLPLCFF IENNRYAVST TVEEVTAEPR LSSRGLAFGI PAWKVDGMDP
LAVYLATTAA VEKMRAGEGP TIIEADVYRY FHQNGPLPGS AFGYRSKREE EAWRKRDPID
RIAAEMASRQ LIGEEQVALL RAQARTLMEE VAAGLVEQHD GKRRIVPSLW PSPDFRDFGI
RGDLSELRDV RFLEQDDFPG QIVESRFVDV IADVMDRRMR EDESIVVMGE DVHRLKGGTN
GATRGLSASF PDRVLATPIA ENAFVGLAGG IAMDGRFAPV VEFMYPDFMW VAADQVFNQI
GKARHMFGGD GEVPLVLRTK VAMGTGYGSQ HSMDPAGIFA TSPGWRIVAP STPYDYVGLM
NSALRCKDPV LVLEHVDLYN SKGPAPVGDL DYFIPLGKAK LLRTGLRLTV LTYLAMVRPV
LDAVEHLNVD ADVIDLRSLD RAGVDWAMIE QSIEKTGNVL IVEQGAAGTS YGGWLAAEIQ
NRCFDMLDQP IQRVHGGEAS PSISKVLETA ACAGASEIET GLRIVMAAQG RALG
|
|---|
| |