Gene Caul_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0247 
Symbol 
ID5897521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp274156 
End bp274998 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID641560731 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_001681882 
Protein GI167644219 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.439609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAA GCGGCGATAT CAAGAGCGCC TTCGAGGCCG ATGGCTTTGT CCGCGTGAAG 
GGGTGCCTGC CGCGGACCCT GGTTGAGGAC TATTTGGGTC AAGTCCGCGA GGTGATCGAC
CACGTGGCGG CCAGCCGCGA CGTGCGGCTT TCCCGCGAAA TGACCACCGA CGAGGCGTTC
AACGCGCTAT GCGCCGCCGA CCGCGGCTTT GGCGGGATGG TCTACGACTG CATGCGTCTG
CATCCGCTGA TGCCGGCGCT GGCCGCCCAT CCCAGGATCG TCGAGATCGC CACCGAGCTT
CTTGAGGCCA AGCTCTGTTT CCACGTTCAT GACCAGGTCC ACTTCCGGAT CGACCGGAAG
GACGAAGAGC GCTTCAACCT CGCCTGGCAC CAGGACTATT GGTACAACAA CTCGACGCAA
CACGCGGTCA CCGCCTGGAT CCCGCTGGTC GATGTGCCGG TCGAGAAGGG TCCGATGCGG
TTCATCCCGG GCAGCCATCG CTCGATCCTG CCGATCGCGG TGGATCCGCA GTTTCACAAC
AGATGGGACA TGAGCCGCCT GATCCTGCCG GCCGATCCGA TCGCCTTCGA CGCGGGGGTC
GATGTCCCGG CGGAGGCGGG GGACGTGGTG TTCCTCCACG CGCTGAGCGT CCATCGCTCG
GGCCTCAATC AAGTGGCCGG CAATCGTTTC ACGGTGGTGC TGCGATTCTC CGATTTGCTT
CACGACGAAC TGGTCGATAA GCGCTGGAAG ATCGGACTCC GAGTCGGGTG GGCCTCGCTG
ATCGAGCAGC GCCCGGACTT GATCCGCAAC TACAACGAAC TGCAGCAATC TGGAGCGGTA
TGA
 
Protein sequence
MQTSGDIKSA FEADGFVRVK GCLPRTLVED YLGQVREVID HVAASRDVRL SREMTTDEAF 
NALCAADRGF GGMVYDCMRL HPLMPALAAH PRIVEIATEL LEAKLCFHVH DQVHFRIDRK
DEERFNLAWH QDYWYNNSTQ HAVTAWIPLV DVPVEKGPMR FIPGSHRSIL PIAVDPQFHN
RWDMSRLILP ADPIAFDAGV DVPAEAGDVV FLHALSVHRS GLNQVAGNRF TVVLRFSDLL
HDELVDKRWK IGLRVGWASL IEQRPDLIRN YNELQQSGAV