Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0247 |
Symbol | |
ID | 5897521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 274156 |
End bp | 274998 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641560731 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_001681882 |
Protein GI | 167644219 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.439609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGACAA GCGGCGATAT CAAGAGCGCC TTCGAGGCCG ATGGCTTTGT CCGCGTGAAG GGGTGCCTGC CGCGGACCCT GGTTGAGGAC TATTTGGGTC AAGTCCGCGA GGTGATCGAC CACGTGGCGG CCAGCCGCGA CGTGCGGCTT TCCCGCGAAA TGACCACCGA CGAGGCGTTC AACGCGCTAT GCGCCGCCGA CCGCGGCTTT GGCGGGATGG TCTACGACTG CATGCGTCTG CATCCGCTGA TGCCGGCGCT GGCCGCCCAT CCCAGGATCG TCGAGATCGC CACCGAGCTT CTTGAGGCCA AGCTCTGTTT CCACGTTCAT GACCAGGTCC ACTTCCGGAT CGACCGGAAG GACGAAGAGC GCTTCAACCT CGCCTGGCAC CAGGACTATT GGTACAACAA CTCGACGCAA CACGCGGTCA CCGCCTGGAT CCCGCTGGTC GATGTGCCGG TCGAGAAGGG TCCGATGCGG TTCATCCCGG GCAGCCATCG CTCGATCCTG CCGATCGCGG TGGATCCGCA GTTTCACAAC AGATGGGACA TGAGCCGCCT GATCCTGCCG GCCGATCCGA TCGCCTTCGA CGCGGGGGTC GATGTCCCGG CGGAGGCGGG GGACGTGGTG TTCCTCCACG CGCTGAGCGT CCATCGCTCG GGCCTCAATC AAGTGGCCGG CAATCGTTTC ACGGTGGTGC TGCGATTCTC CGATTTGCTT CACGACGAAC TGGTCGATAA GCGCTGGAAG ATCGGACTCC GAGTCGGGTG GGCCTCGCTG ATCGAGCAGC GCCCGGACTT GATCCGCAAC TACAACGAAC TGCAGCAATC TGGAGCGGTA TGA
|
Protein sequence | MQTSGDIKSA FEADGFVRVK GCLPRTLVED YLGQVREVID HVAASRDVRL SREMTTDEAF NALCAADRGF GGMVYDCMRL HPLMPALAAH PRIVEIATEL LEAKLCFHVH DQVHFRIDRK DEERFNLAWH QDYWYNNSTQ HAVTAWIPLV DVPVEKGPMR FIPGSHRSIL PIAVDPQFHN RWDMSRLILP ADPIAFDAGV DVPAEAGDVV FLHALSVHRS GLNQVAGNRF TVVLRFSDLL HDELVDKRWK IGLRVGWASL IEQRPDLIRN YNELQQSGAV
|
| |