Gene Cagg_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3842 
Symbol 
ID7266322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4679404 
End bp4680144 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID643568653 
Producthypothetical protein 
Protein accessionYP_002465113 
Protein GI219850680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000404795 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCGGTTA TTGATACGTT CAATAAAACG CTGATGCTTA ATCAGAGTGT CTTTATCGAA 
ATGCGCGATG CTCGTGATGG CGTGCGGCGC GGGTTTCTCC TGATTTTGAT GGTCGGTTTG
CTCGTAGGGG TAATCCAAAG TGTCAATTTG TTGATCGCAT CTTCAGATCC CGAACGGATC
GTACAAGACA TCTTAGCAAA CTATCGCCAA ACGGTTGAAC AGCAACGCGC GGCAGCTACG
ACACCTGAAC AGCGCGAAAT CGTCAGGATA CTCGAAGAGA GCGAAACGTT CGTTGCCGAT
CTCGTGCGTG ATCTCCTGAG CTTGTCGTCA GTGTTACCGC GACCGGTTGC ATTGGTCTTG
CAAGCCCTTG GTCAAGCCGT CTCAACGCCG CTGAGCTATC TGAGTGGTAT GCTGTTGGCA
GTGGTACTGA CGCATGTCGC AGCGCGTCAG TTGGGTGGTC AAGGTGGTAT TCGAGCTATG
GTTGCGGTCG GTTCGCTGTC GGTAGCACCG CACGCGCTCG ATGCACTGAC CTTCATCCCT
ATTCTCAGTT TTCCCTTAGG AGTGATTGCA TGGGGATGGG GATTGATTAT CTTAATCAAC
GGTACGGCGG TGGTGCATCG GTTTGATACC GGTAAAGCAA CGTTGGCTGT GCTTCTTTAT
CCAAGTTTGT TGATCGTGCT CGCCATTCTA TTCAGTTGTT TGCTCATCGT CCTGGTGACG
GCGCTGGCAG CGACGGTATA G
 
Protein sequence
MSVIDTFNKT LMLNQSVFIE MRDARDGVRR GFLLILMVGL LVGVIQSVNL LIASSDPERI 
VQDILANYRQ TVEQQRAAAT TPEQREIVRI LEESETFVAD LVRDLLSLSS VLPRPVALVL
QALGQAVSTP LSYLSGMLLA VVLTHVAARQ LGGQGGIRAM VAVGSLSVAP HALDALTFIP
ILSFPLGVIA WGWGLIILIN GTAVVHRFDT GKATLAVLLY PSLLIVLAIL FSCLLIVLVT
ALAATV