Gene Cagg_3807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3807 
Symbol 
ID7266287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4644078 
End bp4645214 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content60% 
IMG OID643568619 
Productpeptidase M20 
Protein accessionYP_002465079 
Protein GI219850646 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.414196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACCT GCACCGATAT TGCAGCCCAC GAGTCGGCCA TGCTCAACCT CATCGCCCGT 
CTCGTCCACC TCGAATCACC GAGTACCGAT AAAGTCCTCC TCGATGTATG CGCCGACGAA
CTGGCCGATC TCTTCGCCCG CATTGGCACC GTTGAGCGCA TTGCCAACCC TGCCGGCGGT
GACCATCTAC GTGTAACCGT GACCGATGTT GCCGATCCAT CGTTACCACC GGCGCTGGTG
CTCTGTCATT ACGATACCGT TTGGCCGGCG GGAACGATCA GCCAACGACC TTTTACCCTC
ACCGATGATC GCGCGTTCGG ACCGGGGGTA TACGATATGA AAGCGAGTAT CGCGATGGTC
TATACCGCGC TCGGTGGGTT TGGTCACCCT GCACCACGTT TACGCCGACC GGTTATCGTG
CTGTTGACCT CTGATGAAGA GATCGGCAGT CCCACTTCAC GCAAACTGAT CGAAGCAACT
GCCCAACAGT CAGCCCACGT CCTGGTGATC GAACCACCAA CCGAACCGGA TGGTGCACTG
AAGACGGCGC GCAAAGGTGG TGGTGCCTTC CGGGTTGTGA TTACCGGTCG TGCCGCTCAC
GCCGGCGTCG AACCGGAAAA GGGAATTAGC GCCTTGACCG AACTAGCGCA CCAGATTCTG
GCGGTCAATG CGTTGGCCAA TCCGGCGCTT GGCACGACGG TGAATGTTGG CGTGGCCGGT
GGCGGTACCC GCCCCAACGT TGTCCCTGCC GAAGCGTGGA TGGAGGTTGA TGTACGAGTG
TGGACACAAG CCGAAGCGGA GCGGATCGAG GCAGGTATGG CGGCACTCAA GCCGATAACA
CCGGGAACAC AGGTGAAGGT AAGTGGGAGT GTCCGCCGAC CACCGATGGA ACGCACGCCG
GCGAGTATTG CGCTCTTTAC CCGTGCGCAA GAACTCGGTG CAGCGTTAGG GTTAGATATC
CGCGAAGGCA GCACCGGCGG CGGCAGCGAC GGAAATTTCA CGGCTGCGCT CGGCGTTCCC
ACCCTCGACG GGTTGGGGTG CCCCGGCGCC GGTGCGCATG CCGACCACGA GCAGATCAAC
CGACGTGGAC TGATCGAACG CACTGCGTTG TTGTGTGCGT TGTTGGAAGA AGTCTAG
 
Protein sequence
MLTCTDIAAH ESAMLNLIAR LVHLESPSTD KVLLDVCADE LADLFARIGT VERIANPAGG 
DHLRVTVTDV ADPSLPPALV LCHYDTVWPA GTISQRPFTL TDDRAFGPGV YDMKASIAMV
YTALGGFGHP APRLRRPVIV LLTSDEEIGS PTSRKLIEAT AQQSAHVLVI EPPTEPDGAL
KTARKGGGAF RVVITGRAAH AGVEPEKGIS ALTELAHQIL AVNALANPAL GTTVNVGVAG
GGTRPNVVPA EAWMEVDVRV WTQAEAERIE AGMAALKPIT PGTQVKVSGS VRRPPMERTP
ASIALFTRAQ ELGAALGLDI REGSTGGGSD GNFTAALGVP TLDGLGCPGA GAHADHEQIN
RRGLIERTAL LCALLEEV