Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3728 |
Symbol | tgt |
ID | 7267801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 4539879 |
End bp | 4541090 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643568535 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002465000 |
Protein GI | 219850567 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00382778 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACACT TCACGATTAC CGCCCGCGAC CCTCACAGTC GTGCGCGCAC CGGCCGCTTA CGAACAGCTC ATGGCGAGGT CGAAACCCCG GTATTTATGC CGGTAGGTAC TCGGGCTACG GTTAAATCGC TCAGCCCGCA TGAACTGCGC GAACACGGCG CATCGATTAT CCTGGGGAAT ACGTATCATC TTTATTTGCA GCCCGGTCAC GAATTGATCG CCCGTCACGG AGGGCTGCAC GGATTTATGA GCTGGAACGG TCCAATCCTC ACCGATAGTG GCGGCTTTCA GGTCTTTTCA CTGGTGTACG GTGGGATTGC CGATGAAGTA AAAGGTCGCC GACCCGCCCA CCCGACACGG TTGGCCGATA TGGTGACCGT CACTGAGGAG GCCGTTATCT TTAAATCGTA CCTTGACGGT TCGCGTCATG TCTTTACGCC AGAACGGAGT ATCGAGGTGC AACATCACCT TGGCGCCGAC ATTATCGTCT GCTTTGACGA ACTTCCGCCG TTCCGCGCCG GCTACGACTA CACTGCACAG AGTATGGCCC GTACCCACCG CTGGGCCGAG CGCTGTTTGG TAGCCCACCA ACGGCGCAAT CGCGCTGCAC TCCCTAACCC CGACCAACTC CTGTTTGGGA TTGTGCATGG CGGTATCTTT GCCGACCTAC GCCGGGCGAG CGCCGAGTTC ATCAGCAGTA TGCCGTTTGA TGGTCTCTGT ATCGGTGGAT CGCTGGGAGC TAATAAGGCC CAGATGTATG AGGTGGTTGA TATGACCGTA CCCTACTTAC CCGACGGTAT GGCCCGCCAC CTCCTTGGTG TTGGAGATGT TGATGATCTC CTCGAAGGAG TTGCGCGTGG GATCGATATG TTCGATTGTG TCAGCCCTAC TCGACTCGGA CGGCACGGGG CAGCCCTCAT TCGCAATCGC GAACGCAACT GGCGGCTCAA TGTGACAAAT GCGACGTTAC GTGATGACCC AGGCCCATTG CAAGCGGGTT GTCCGTGTTA TACGTGCCGG CATTTCTCAC GGGCGTACAT TCATCACCTC TACCGCTCGA AAGAACTACT TGGGATCAGG CTGGTCAGCT TACACAACGT CGCTTTCCTA CTAAACCTGA TGGCCGAGGT ACGTGCCGCT ATCGCCGCCA ATCGCTTTGG TGAACTGTAC TATGAGTGGT TGGGGAAGCC GTTGCCGGAT ATAACACCCT AA
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Protein sequence | MTHFTITARD PHSRARTGRL RTAHGEVETP VFMPVGTRAT VKSLSPHELR EHGASIILGN TYHLYLQPGH ELIARHGGLH GFMSWNGPIL TDSGGFQVFS LVYGGIADEV KGRRPAHPTR LADMVTVTEE AVIFKSYLDG SRHVFTPERS IEVQHHLGAD IIVCFDELPP FRAGYDYTAQ SMARTHRWAE RCLVAHQRRN RAALPNPDQL LFGIVHGGIF ADLRRASAEF ISSMPFDGLC IGGSLGANKA QMYEVVDMTV PYLPDGMARH LLGVGDVDDL LEGVARGIDM FDCVSPTRLG RHGAALIRNR ERNWRLNVTN ATLRDDPGPL QAGCPCYTCR HFSRAYIHHL YRSKELLGIR LVSLHNVAFL LNLMAEVRAA IAANRFGELY YEWLGKPLPD ITP
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