Gene Cagg_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3493 
Symbol 
ID7266421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4257763 
End bp4258809 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content51% 
IMG OID643568301 
Productprotein of unknown function UPF0118 
Protein accessionYP_002464768 
Protein GI219850335 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAT TTGTCATTCG TCATATTGCC GGCTGGATTG GTTTACTCAG TGCCGTGGTA 
GCTGCTTGGC TGATTATTCA TTATGCGACG CTGTTGCTCG AAGTGGTTGG TATCCTCTTT
GGCGCTACGT TGTTGAGTTT GGCGATTGCT CCAATTGCCG AGCGATTGGC CCATTGGCAT
GTGCCTCGTG GTATCACCGT TCTTGCCGTG TATATCCTCG GTGGTATAGT GTTGATCGCG
CTGATCGAAC TTTTAATCCC GGTGATCCGC ATCGAAGCAC AAGCATTACG TAGCCAAGGA
CCACACCTGT TCCAACAAGT AACCGCATGG GTGTCCGGTC TACCGGTGAT CGGTAGTACA
GTACTGAGCA TGCACCAGAG TACAATCCCC AACCTCGGTC AACAACTCGG TAATGTTATC
GATTCAGTGG TTCGCATCCT TTTTGGTACC GGTGGTTTAT TGCTCGATTT GCTCATCGTG
ACCGTGTTGA GCTTTTTGTT CATTACCGAT CCCGGCTTGC CAAAACGGTT GATAGCAAGC
TGGATTCCAG CCGCTGTTCA ACCGCGACTG CAAGATTTCA TCGAACGGTT GCGTCGCCGC
TTAACTCGCT GGATCTGGGC CCAAATCTTG ATCGCTCTCT ATTTTGTAGT TGTGTATAGT
ATCGGGCTCA GCGTACTTGG CGTCCCTTTC GCCCTCACTA TCGGTATCGT CGGTGGTTTA
CTCGAGATCG TACCGTATGT GGGTGGTGCT TTCGCACTCA TATTAGCAGT TATTAGTAGC
TTATCGGTGA GTCCATGGTT GGTGATCTGG GTCATCGTTT TTCACGTGGT GGTCGTTGAA
CTTGAATCAC ACGTGATCGC CCCTGCACTC TACGGACGGA TCATCGGTGT CCATCCTGCG
CTCATGTTGC TTGCCTTGTT CGTAGGGGCG AAAACCGGTG GTGTATTGGG GGTGTTTTTT
GCTGTTCCGG TCACGGTGGT TATCCTGGCA TGCGGACAAG AGTTACGGCA TAGCTTTGCG
ATATCGAATC GGACAACCAA TTCATAG
 
Protein sequence
MSRFVIRHIA GWIGLLSAVV AAWLIIHYAT LLLEVVGILF GATLLSLAIA PIAERLAHWH 
VPRGITVLAV YILGGIVLIA LIELLIPVIR IEAQALRSQG PHLFQQVTAW VSGLPVIGST
VLSMHQSTIP NLGQQLGNVI DSVVRILFGT GGLLLDLLIV TVLSFLFITD PGLPKRLIAS
WIPAAVQPRL QDFIERLRRR LTRWIWAQIL IALYFVVVYS IGLSVLGVPF ALTIGIVGGL
LEIVPYVGGA FALILAVISS LSVSPWLVIW VIVFHVVVVE LESHVIAPAL YGRIIGVHPA
LMLLALFVGA KTGGVLGVFF AVPVTVVILA CGQELRHSFA ISNRTTNS