Gene Cagg_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3476 
Symbol 
ID7269702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4239473 
End bp4240480 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content58% 
IMG OID643568285 
Producthypothetical protein 
Protein accessionYP_002464752 
Protein GI219850319 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCT CTGATTTTCG TCATCTCAAC CAAACTGTTT CGCCCGCGGC TACAGAGTTG 
GGTGAGGCGT GGCAACGCAC GCTCAGTCGG TTAGGCGACT ATACCGCTAT TGTCGTGCGG
GCACTTAACT TACGCCCACA AGCGGCAACG TTGTACCGGC AGACCGAGCG CCATGTGCTG
GTGCGGTTGA CGTTGCCGAC GGAACACGTC GTGTTGCGCA TATCGCCGGA AGACGATTTG
GCAGCGCACG TCGCCTTTTT ACGTGGGATG GCGTTGGAAG GTATTCCGGG CACGCGGATT
ATTCAGCGCG ATTTGAGTAA AGCTGCGGTA CCCTTCGCCT ATACCCTAGA GAGCTTTGTT
GCCGGACAAA CGGCTGACAC CCTGCACGAC GATCATCTGC TGCACAGCAT TGCCCGCCAA
GCAGGACGAG CACTACGGCG ATTGCACCGG CAACGGATGC CGGGCGCAGG TCGACCGACG
GTTAGTGGGC GCTGGCCGCG GCTTAGTTGG CGGCATGTGT TGATGGCGAT TGGGCAGCGG
CTGGCTAGTC CGCCAACCCC GCAATTGATT TTTCAGGCGG AAGAAGTTGC TGTGTTGCAA
GCGATAGTGC ATGATCGGCT GCTCGATTGC GCAACACCGG TGCTCATTCA TGGCAACTTT
GGCCCGCAGG CGGTACGCTG TACGGTGGGT GGTCAGTACG TTCATTTGGA GGCATTAGAG
GAGCCGGGCT GGTTTATCAG CGGTGATGGT TTATTCGATG TGGCCTTGGG GATGTGTGCC
CATCTCCCGA CGGCGTGGCG CGAAGGTCTC TATGAAGGGT ATTGTAGTGC TGGCGTGTTG
AATGACAGCG AGCGTGAGCG GTTGCAGATG CTCCGTTTAC TGGCCTGTGC GTGGAGTGCC
TGTGATCGCT ATGCTCGTGG GTTGCCGCAC GAAGCGGATC TGGAGGAAGC GCAGCGATTG
ATGCGGGCTA TTATCGTGGC AGATGCGAAA TATCTATCGG CGCAGTGA
 
Protein sequence
MIISDFRHLN QTVSPAATEL GEAWQRTLSR LGDYTAIVVR ALNLRPQAAT LYRQTERHVL 
VRLTLPTEHV VLRISPEDDL AAHVAFLRGM ALEGIPGTRI IQRDLSKAAV PFAYTLESFV
AGQTADTLHD DHLLHSIARQ AGRALRRLHR QRMPGAGRPT VSGRWPRLSW RHVLMAIGQR
LASPPTPQLI FQAEEVAVLQ AIVHDRLLDC ATPVLIHGNF GPQAVRCTVG GQYVHLEALE
EPGWFISGDG LFDVALGMCA HLPTAWREGL YEGYCSAGVL NDSERERLQM LRLLACAWSA
CDRYARGLPH EADLEEAQRL MRAIIVADAK YLSAQ