Gene Cagg_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3421 
Symbol 
ID7269646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4160018 
End bp4161232 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID643568231 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002464699 
Protein GI219850266 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.135241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACTT CGCACTGGCA CGCCACCCTT GATCGCCCAC CATTGCCGGT GATCGATCTG 
CCCTCTACAG CCGAAGTAGT CGTCGTCGGA GCCGGTGTGG TTGGTGCAAC CACAGCCCTT
TGGCTTACCC GCGCTGGCCT GCGTCCGCTG GTGATTGACC GCTCTGGACC GGCAGCCGGC
GCAACCGGTC ATAACGGTGG TATTCTCGCT GCCGGTTTGG CCGAAAACTA TCTGGCCGCC
ACCGCCCGGT ATGGGCACGA CACAGCGCGC GCCCTCTACG CTCTGAGCTT GACCGGTCAA
CGTCTCATGG TGGAGTTGAT CGAGCAAGAG CAGATCGACT GCGATCTCCG GCTTCACGGT
AATTTGAACT TTGCCCTTGG CGAGGCACAG TTGTCAATTG CGGCTGCCAC AGTAGCCAGC
CTGCACGCTG ATGAGTTTCC GGCTACCCTT CTCGACCGCA CCGCAGCCCA GGAATTTGTC
CGTATTCCAC TCGGTGCGGC AGTTTCCGGT GCCCGTTTCA ATCCCGCTGC CGGTACCGTA
CATTCCGGTA AACTCGTGTA CGGCCTGCTC GCTGCTGCCC AGCGCTACGG TGCGCACGTG
AGTTGGGGGG CAACCTTACA ACAGATTGTC ACCGCAGATG GCAGCCTGCG CCTCGTCACC
GATCGCGGTA CTATCACAAC CCCGGCAGCT GTCATCGCAG TGAATGCGTG GAGTGGTGAG
GTGTTACCGG AATTAGCCGC ACACATCAAG CCGGTAAGAG GTCAAGTACT GTGTACCGTA
CCGGTTGAAC CCTTCATCAC GTGCGGGTTC GGTGCAAGTC TGACTGCCAC CGGCGAATAC
GGCCAGCAAC TACCCGGCGG TCAAGTCTTG TTCGGTGGTT GCCGCGCTAT CGCTCCCAAC
CACGACGTTG GTGTCCCCCC CGGTGACGTC AGCCCGGATG TACAGAACGC GCTCGAGACC
GGGTTGGGCC GTCTCTTCCC CACCCTTGCC GGTATCGCCA TCGAACGGCG CTGGTCGGGA
CCAATGGCGT TCACCGCCGA TTATTTACCA ATTGTGACGC AACCTGCCAC CGGCCTATTC
GCTATTGGCG GATTCTCCGG CCACGGGATG CCGTTCGCAG CCATCGTTGG TCGCTACCTC
GCCGAGGCGG TGCAGACTGG TACACTGCCC GCGGCGTTGG CGTTGTTGGG GATGGAGCGA
GCGACGTTGT TGTAG
 
Protein sequence
MLTSHWHATL DRPPLPVIDL PSTAEVVVVG AGVVGATTAL WLTRAGLRPL VIDRSGPAAG 
ATGHNGGILA AGLAENYLAA TARYGHDTAR ALYALSLTGQ RLMVELIEQE QIDCDLRLHG
NLNFALGEAQ LSIAAATVAS LHADEFPATL LDRTAAQEFV RIPLGAAVSG ARFNPAAGTV
HSGKLVYGLL AAAQRYGAHV SWGATLQQIV TADGSLRLVT DRGTITTPAA VIAVNAWSGE
VLPELAAHIK PVRGQVLCTV PVEPFITCGF GASLTATGEY GQQLPGGQVL FGGCRAIAPN
HDVGVPPGDV SPDVQNALET GLGRLFPTLA GIAIERRWSG PMAFTADYLP IVTQPATGLF
AIGGFSGHGM PFAAIVGRYL AEAVQTGTLP AALALLGMER ATLL