| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3410 |
|---|
| Symbol | |
|---|
| ID | 7269635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 4148449 |
|---|
| End bp | 4149276 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643568222 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002464690 |
|---|
| Protein GI | 219850257 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0325873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTC TTTTTCAGGA AACAGACACT GCGTCATCAG CAGCCGATCT GAGGACGTGG
GCGATTAAAG TGCAGGGTGT TACAAAGCAC TATCAGACGC GGGGCGGCGC AGTGCAAGTA
TTGGCCGGTA TCAATTGTAC CGTTGCCGCC GGCGAGGTAG TAGCGCTGGT GGGGCCGAGC
GGGTGTGGCA AGAGCACGTT ATTGCGGATC GTGACCGGGC TTGAAAGTCC TGATGGCGGT
GTTGTAAAGT TATTCGGTTT GTCACCAGTG CAAGCTCGGC GTGAGCACCG ATTTGGGATC
GCATTTCAAA CGGCGGCTCT GCTTGAGTGG CGTGATGCAG CGGCCAATGT GGCATTACCG
CTTGAGTTAG CCGGCTGGTC ACCGGAGGCA CGGAAAGCAC GGGTAGCTGA ATTACTTGCA
CGGATGGGGT TAAGCGATGC TGCACACCGC CTACCGCGGC AATTGTCGGG TGGTATGCAG
CAACGGGTAG CGTTGGCACG AGCGTTGGCA TTAGCTCCGC CGATACTCTT GCTCGATGAG
CCATTTAGCG CCCTCGATGA GCTAACCCGT GAGCAGTTGC AGGGTGAGTT GCTCGATCTG
TTGGCGACAA TCTCGCCTCG TCCGGCAGTC TTGCTCGTGA CGCATAATCT GACCGAAGCG
GTGTTGTTGT CCGATCGCGT TATTGTTTTA AGCCGGCGAC CGGCCCAAGT GTTGGCAGAA
GTGTCTATCG CTTTACCGCG CCCGCGTCGC GCTGACTTAC GCGATGACGT GCGTCTTCAT
CAGTTGGTAG CTGAGCTGCG GGCTGTGTTA CGTGGCAATG GTGGGTGA
|
|---|
| Protein sequence | MAILFQETDT ASSAADLRTW AIKVQGVTKH YQTRGGAVQV LAGINCTVAA GEVVALVGPS
GCGKSTLLRI VTGLESPDGG VVKLFGLSPV QARREHRFGI AFQTAALLEW RDAAANVALP
LELAGWSPEA RKARVAELLA RMGLSDAAHR LPRQLSGGMQ QRVALARALA LAPPILLLDE
PFSALDELTR EQLQGELLDL LATISPRPAV LLVTHNLTEA VLLSDRVIVL SRRPAQVLAE
VSIALPRPRR ADLRDDVRLH QLVAELRAVL RGNGG
|
|---|
| |