Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3292 |
Symbol | |
ID | 7267766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3989843 |
End bp | 3990835 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643568107 |
Product | transposase |
Protein accession | YP_002464580 |
Protein GI | 219850147 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000349541 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACAACT TGGACGCTCT GGCAGTCGTC CACCCCAACG CGGCCGGCCT CGACATCGGC AGCCACGAAA TCTGGGCCGC CATCCGCCCA GACCACCCCG GCGAGACGGT GCGCCGTTTC GCCACCTTCA CCCCCGACCT GGAAGGCCTC GCCGATTGGC TGCTCGCCTG CGGCGTGGAC ACCGTCGCTA TGGAATCCAC CGGCGTCTAC TGGATTCCGG CCTTCGAGGT ACTCGAACAG CGCGGCATCG AGTGCTTCCT GGTCAACGCA CGCTCCGTCA GGCACGTCCC TGGCCGCAAG TCGGATGTGC AGGATTGTCA GTGGCTGCAA AAGCTCCACT CGTTGGGGTT GCTCTCCGCC TCCTTCCGCC CTGACGCCGA GATGCGTTCC CTCCGCACAC TCTTGCGCCA CCGCGCGCAG CTCATCCAGC ATCGCGCGCC GCACATCCTG CATATGCAGA AGGCGTTGCA GCAGATGAAC CTCCATGCAC CACGTCATGG CGGATATCAC CGGCGAGACC GGCCTCAAGA TCGTGCGCGC CATCGTCGCC GGCGAGCGCG ACCCGCTCAC CCTGGCCCGC CTTCGTCACC CCTCCTGCAA GTCCTCCGAG GAGACCATCG CCAAGGCCCT CACCGGCCAT TGGCAGGAGG AGCAGCTCTT CGTCCTACAG CAGTCCCTCG AGCTGTACGC CTTGACACCT CCAAGACGAA GAACAAGCCT GCCGATTCCA CCCGCGCCGA GCTCTTCCGC ATCACCGGCG TTGACCTCGT CGCCGTGGAC GGCATCAGTG CCAGTCTCGC CCAGACCATC CTCTCCGAGA TCGGCACCGA TATGTCTCGC TTCCCCTCTG GCGGCCCTTC AACGCAAGGC CGCCCAACTC GGCTTCGAGC TCACCCCGAA GGCTGCGCCG GGCCAGAGTT AGCCGGTTCG CCTGCCCGAC TTGCGCTTAC GCGAGCGTCC AATTCGGACG GTCGCGCATT TCGCGTTGTG TGA
|
Protein sequence | MNNLDALAVV HPNAAGLDIG SHEIWAAIRP DHPGETVRRF ATFTPDLEGL ADWLLACGVD TVAMESTGVY WIPAFEVLEQ RGIECFLVNA RSVRHVPGRK SDVQDCQWLQ KLHSLGLLSA SFRPDAEMRS LRTLLRHRAQ LIQHRAPHIL HMQKALQQMN LHAPRHGGYH RRDRPQDRAR HRRRRARPAH PGPPSSPLLQ VLRGDHRQGP HRPLAGGAAL RPTAVPRAVR LDTSKTKNKP ADSTRAELFR ITGVDLVAVD GISASLAQTI LSEIGTDMSR FPSGGPSTQG RPTRLRAHPE GCAGPELAGS PARLALTRAS NSDGRAFRVV
|
| |