Gene Cagg_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3292 
Symbol 
ID7267766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3989843 
End bp3990835 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content65% 
IMG OID643568107 
Producttransposase 
Protein accessionYP_002464580 
Protein GI219850147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000349541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAACT TGGACGCTCT GGCAGTCGTC CACCCCAACG CGGCCGGCCT CGACATCGGC 
AGCCACGAAA TCTGGGCCGC CATCCGCCCA GACCACCCCG GCGAGACGGT GCGCCGTTTC
GCCACCTTCA CCCCCGACCT GGAAGGCCTC GCCGATTGGC TGCTCGCCTG CGGCGTGGAC
ACCGTCGCTA TGGAATCCAC CGGCGTCTAC TGGATTCCGG CCTTCGAGGT ACTCGAACAG
CGCGGCATCG AGTGCTTCCT GGTCAACGCA CGCTCCGTCA GGCACGTCCC TGGCCGCAAG
TCGGATGTGC AGGATTGTCA GTGGCTGCAA AAGCTCCACT CGTTGGGGTT GCTCTCCGCC
TCCTTCCGCC CTGACGCCGA GATGCGTTCC CTCCGCACAC TCTTGCGCCA CCGCGCGCAG
CTCATCCAGC ATCGCGCGCC GCACATCCTG CATATGCAGA AGGCGTTGCA GCAGATGAAC
CTCCATGCAC CACGTCATGG CGGATATCAC CGGCGAGACC GGCCTCAAGA TCGTGCGCGC
CATCGTCGCC GGCGAGCGCG ACCCGCTCAC CCTGGCCCGC CTTCGTCACC CCTCCTGCAA
GTCCTCCGAG GAGACCATCG CCAAGGCCCT CACCGGCCAT TGGCAGGAGG AGCAGCTCTT
CGTCCTACAG CAGTCCCTCG AGCTGTACGC CTTGACACCT CCAAGACGAA GAACAAGCCT
GCCGATTCCA CCCGCGCCGA GCTCTTCCGC ATCACCGGCG TTGACCTCGT CGCCGTGGAC
GGCATCAGTG CCAGTCTCGC CCAGACCATC CTCTCCGAGA TCGGCACCGA TATGTCTCGC
TTCCCCTCTG GCGGCCCTTC AACGCAAGGC CGCCCAACTC GGCTTCGAGC TCACCCCGAA
GGCTGCGCCG GGCCAGAGTT AGCCGGTTCG CCTGCCCGAC TTGCGCTTAC GCGAGCGTCC
AATTCGGACG GTCGCGCATT TCGCGTTGTG TGA
 
Protein sequence
MNNLDALAVV HPNAAGLDIG SHEIWAAIRP DHPGETVRRF ATFTPDLEGL ADWLLACGVD 
TVAMESTGVY WIPAFEVLEQ RGIECFLVNA RSVRHVPGRK SDVQDCQWLQ KLHSLGLLSA
SFRPDAEMRS LRTLLRHRAQ LIQHRAPHIL HMQKALQQMN LHAPRHGGYH RRDRPQDRAR
HRRRRARPAH PGPPSSPLLQ VLRGDHRQGP HRPLAGGAAL RPTAVPRAVR LDTSKTKNKP
ADSTRAELFR ITGVDLVAVD GISASLAQTI LSEIGTDMSR FPSGGPSTQG RPTRLRAHPE
GCAGPELAGS PARLALTRAS NSDGRAFRVV