Gene Cagg_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3223 
Symbol 
ID7267370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3907587 
End bp3908093 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content53% 
IMG OID643568044 
Productexonuclease-like protein 
Protein accessionYP_002464517 
Protein GI219850084 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000951035 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.223886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCT ATCTTGACAT CGAAACTACG TACAGCGGCA CGATCAGTGT CATCGGGATT 
TACCGCCATG ATCGCGGTAC GATCCAACTG GTGAGCAGTG GAATCTATGA TATTACGCTG
TACAATGCAC TCGAAGGCAT CTCAACAATT GTCACGTTTA ACGGTAGCAG CTTCGATTTA
CCGACGATCA AACGTCAATT GAATGCCGAT TTGAAAGCGG CATTTGACCA TCGTGATCTG
TTACACGAAT GCCGTCGGCG AGGGTTACGC GGCGGGCTCA AAGGGGTCGA AGATCGACTC
GGCATTACGC GCGCATCTAC CGGTCTTAGT GGGCGCGATG CACCTCGGCT GTGGGCACGG
TATGAGCAGT ACGGTGATTA CACGGCATTG CGAACGCTTC TCACGTACAA TCGCGATGAT
GTGGTCAACC TGGCAGTGCT TGAAGCCCAC CTCGACGCAC TCCCGACGCC AACGGCTAAT
CCGGCTTGGA AAGTGATTAT CGAATGA
 
Protein sequence
MRAYLDIETT YSGTISVIGI YRHDRGTIQL VSSGIYDITL YNALEGISTI VTFNGSSFDL 
PTIKRQLNAD LKAAFDHRDL LHECRRRGLR GGLKGVEDRL GITRASTGLS GRDAPRLWAR
YEQYGDYTAL RTLLTYNRDD VVNLAVLEAH LDALPTPTAN PAWKVIIE