Gene Cagg_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3215 
Symbol 
ID7267362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3899949 
End bp3900944 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content53% 
IMG OID643568036 
Productprotein of unknown function DUF95 transmembrane 
Protein accessionYP_002464509 
Protein GI219850076 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0604768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.220774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCC CTGATCGTCA GATTCGGCAA CGCAGCAGCG CGTGGGCGCG ACTCGAAGCG 
CTACTTGATC AAGCGCATCA AAGCATTGTC CAATTACCGG CGGAGGAACT GCGCGAATTG
GGTGAGTTGT ACCGCCAAGT CTGTACCGAT CTAGCGATTG CACGCCGCGA CTTCCCCGAT
CATCCACAGA CTGCGTATCT CAACCAGCTC GTTGCCCGCG CTCACGGTAC CATCTATCGT
TACAGTGTCA ATGAGCCAAA CCGGATTCTT ACGTTCTTTC GCATAACCTT ACCGCGCACG
TTTCGCGCAA CTTGGCCGAT GACGCTTACC GCAGCCCTGG TCTTTCTGTT ACCGGCAATC
ATTGCGTTTA TCGCCGCATT TCGCGATCCG ACCTTGGGTG AGGCGTTTGT TCCCGGGATC
GACGGTATTG TTTCCCAGAT TCAAAATGGC GAAGAGTGGT GGTTACGGAT TAACGAAGGG
CCTGCTGCTG CTTCAGCCGA GATTATGACG AACAACATTA ATGTTGCTAT CCGAGCATTT
GCCGGTGGGA TAACCTTTGG TATCTACACC CTCTATATTC TGCTGACAAA CGGCTTGTTG
TTGGGTACAG TTGCCGGGAT TGCTCAACGC TTCGCCTTCG CCGATAATTT GTGGAGTTTT
GTCATCGGCC ATCTTACGCT CGAACTCAGT GCCATTTTTA TCGCCGGTGG CGCCGGTTTG
CAACTTGCGT GGGCTATCCT ACGTCCGGGA ACACTCAGCC GACGGAATGC GCTGATGATC
GCCGGGCGCC GCGCCATCAT TCTCGTGATC GGCTGTGCCG TAATATTAGT TGCGGCAGGG
CTGATCGAAG CATTTATCTC ACCAACCGAT CTGCCGTTTT TGCTCAAACT CATCGTTTCC
CTTGGTTCAG GTGGGTTACT CTATACGTAT TTATTCCTAA GCGGGCATGA AGTTCGAGAC
GGTTCACCCC CTTCAGCGCC AGATCAGCCG AATTGA
 
Protein sequence
MITPDRQIRQ RSSAWARLEA LLDQAHQSIV QLPAEELREL GELYRQVCTD LAIARRDFPD 
HPQTAYLNQL VARAHGTIYR YSVNEPNRIL TFFRITLPRT FRATWPMTLT AALVFLLPAI
IAFIAAFRDP TLGEAFVPGI DGIVSQIQNG EEWWLRINEG PAAASAEIMT NNINVAIRAF
AGGITFGIYT LYILLTNGLL LGTVAGIAQR FAFADNLWSF VIGHLTLELS AIFIAGGAGL
QLAWAILRPG TLSRRNALMI AGRRAIILVI GCAVILVAAG LIEAFISPTD LPFLLKLIVS
LGSGGLLYTY LFLSGHEVRD GSPPSAPDQP N