| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3197 |
|---|
| Symbol | |
|---|
| ID | 7267344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3880696 |
|---|
| End bp | 3882324 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643568018 |
|---|
| Product | ATPase associated with various cellular activities AAA_5 |
|---|
| Protein accession | YP_002464491 |
|---|
| Protein GI | 219850058 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.046131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.40537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCT CGTTACCCGC CCTGCAAGCC TTGCTCGAAC CCGGCGTTGG ACCACGCTGG
CAAGCGGTGC AACGCCTACT CCATCCAGAA ATGTTGGCGC TCGCCAATCG AGTTGCCGAG
CGCGCAGCAA AATTGTTGGC TCGCCAATGG CCACTGTACG AGCTGAGTTT TAAGACACGT
CGCGCAATTG ACCGTGGTCG CGGTCGGCGT GACCCGATTG AAGATTACTG GTTTGCATTC
GACCGGCCAC CGCGCGGCGC CGGGGTTATG CTGACGGTAA GTGGGGCAGA ACGCACGGTT
GCAGCCGGCC TGCAACTCTG GGGCATCCGC CGGCCACAAT TAGCCCAACT CTGGCGCGAT
GCCCGTCCTT TGTGGGAGCC GCTCATTGAC CGGATCGGCA CCGAGGGACA GGCCCGCTTT
ACCAGTCGCC GGCCGCTACT GCCGGGGATG CGCTGGATCG ATCATTATTT GGCACAACGC
CAGGCACAGT ATCTGTGGGC CGGATTTGTT TATCCGTGGG AGAATTTGCC ATCGGCTGAA
CGGTTGATTG ATGATCTTTG TGCGCTCTTG CCGCTCAATG AAGCGTTGAT GGAACTAGCA
GAGCTTGATC TGGCAGCAAC CAATACGCTC TGCGAAACAT CGGCAGTGTA CGTAGCGGGA
ACACCGCTGT TCGAGCAGAT CGCAGCTACT ATTCGGCGAC GCGGGATGGT GATCGACGAT
CAAACGCTAC ACGCTTTTCA CCTCGCCGTA CAAGCCCGGC CGTTGGTCAT TCTGGCCGGG
CCAAGCGGTA GTGGTAAGAC GTGGTTGACC CGCCTCTACG CCGACGCATT GATCGGGGTT
GGAGAGGGTC AAGCGAATCC GATCTATCTG CCGGTAGCCG TCCAACCTGA CTGGCATAGC
GCCCGTGATC TGCTAGGGTA TTACAATTCG TTGACCGGGT TATACCAACC AACACCATTT
TTGCGTCACC TGCTTGCAGC CGCGGGCGAT CCCGGTCAAA CGTACATTGT CTGCCTCGAT
GAGATGAATC TGGCCCGACC TGAATATTAC CTTGCCCCAA TCTTATCGGC AATGGAAACG
TCCGACGGAC TGATCGATCT GGGTACTCCG CTCGCCGAAA CACCACTCGC GGGCGGTGGC
ACCGTGCGCA ATCCATTCCG TTTACCGATC AATGTACGGC TGATCGGCAC GGTTAATGTT
GATGAAAGCA CCTTTGCGCT GAGCGACAAA GTGCTCGACA GGGCCAATCT GATCGAGTTA
AAACAGGTCG ATCTGCCGGC GTTACGCACG ATGTATGGGC AGCGTATTGA CGAACAGGTA
TGGCACCTGC TCACCGAGTT CCAAACGCAT CTGAGTGCAG CCGGCAAGCC AGCGGGATAC
CGAGCGCTCG GCGAGACGTT GCGCTTCATC GAGCAAGTAA GTGGAATGAG TGCATTGGAA
GCGCTCGATA TGCAGCTTAT GCAACGATTA CTGCCTCGTG TCCGTGGTGA TGACACACCA
CGGTTCCGCC AAGCGCTGCG CAGCTTACTT ACCCTCTGTA GTGGCCGCTT ACCGCGCAGC
GCCGAGCGGC TCGAACAGAT GTTAGCACGC CTTGACCGCG AAGGATACAC TGACTTTTAC
GGCTATTAA
|
|---|
| Protein sequence | MPFSLPALQA LLEPGVGPRW QAVQRLLHPE MLALANRVAE RAAKLLARQW PLYELSFKTR
RAIDRGRGRR DPIEDYWFAF DRPPRGAGVM LTVSGAERTV AAGLQLWGIR RPQLAQLWRD
ARPLWEPLID RIGTEGQARF TSRRPLLPGM RWIDHYLAQR QAQYLWAGFV YPWENLPSAE
RLIDDLCALL PLNEALMELA ELDLAATNTL CETSAVYVAG TPLFEQIAAT IRRRGMVIDD
QTLHAFHLAV QARPLVILAG PSGSGKTWLT RLYADALIGV GEGQANPIYL PVAVQPDWHS
ARDLLGYYNS LTGLYQPTPF LRHLLAAAGD PGQTYIVCLD EMNLARPEYY LAPILSAMET
SDGLIDLGTP LAETPLAGGG TVRNPFRLPI NVRLIGTVNV DESTFALSDK VLDRANLIEL
KQVDLPALRT MYGQRIDEQV WHLLTEFQTH LSAAGKPAGY RALGETLRFI EQVSGMSALE
ALDMQLMQRL LPRVRGDDTP RFRQALRSLL TLCSGRLPRS AERLEQMLAR LDREGYTDFY
GY
|
|---|
| |