Gene Cagg_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3116 
Symbol 
ID7269534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3775924 
End bp3776742 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content56% 
IMG OID643567937 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002464410 
Protein GI219849977 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.025765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG AGGCCTCTGC TCCTATTACT CCTCCAACCC GGCCGTTGTC GGTACAGGTG 
ACGTGGCGGA TTCGATTGGC TGAATACGGA CCGCCGGCTC TCCTCGTGAT CGGCTTGTTG
CTCCTTTGGG AGGGACTGGT CTGGTTTTGG ACCGTACCGG TCTGGTTACT GCCACCGCCG
TCACGGATTG TGACTACGCT CTTGGGTAGC TTGCCGGTGT TGGTCGAACA TATCTTGGCT
ACCCTTACCG TGACTATCCC CGGCTTCGCA CTGGCATTGG TGACCGGTTT TGGGCTGGGT
GTGGCCCTCG ATGCCTCGCC GTTGCTCCGT CGCGCCCTTT ATCCGCTGCT GGTAACATCT
CAGACGGTGC CGATTGTTGC GATTGCACCG TTATTGGTGG TGGGTTTTGG GTTCGGTCTT
TTACCCAAGG TGTTGGTTGT CGCTCTGATT ACCTTCTTCC CGATTGTGGT CAATACAATT
GATGGGTTGC AGAGCGCCGA TCGCGATCAG CGCCGTCTCC TTGAAGCAAT GGGGGCCACC
TACTGGCAAC TGCTTCGCTT GCTCCGTTTG CGTGCAGCGC TGCCAATGAT CTTTACCGGG
ATCAAAGTCG CGATTACCTA CAGTGTTATC GGTGCAGTCT TGGCCGAATG GATTGGTGCT
AGCGCCGGGT TGGGCGTGTA CATCGCCCGT TCGTTACGCG CTTTTCGCAC CGATCAGGTT
TTTGTCGCGG CATTAGTAAC CTCGTTACTC ACGATTGCCC TCTTTTCGTT GGTGAGTTTG
CTTGAACGCT GGATCGTGTT TTGGAAGGGA GAACACTAA
 
Protein sequence
MSEEASAPIT PPTRPLSVQV TWRIRLAEYG PPALLVIGLL LLWEGLVWFW TVPVWLLPPP 
SRIVTTLLGS LPVLVEHILA TLTVTIPGFA LALVTGFGLG VALDASPLLR RALYPLLVTS
QTVPIVAIAP LLVVGFGFGL LPKVLVVALI TFFPIVVNTI DGLQSADRDQ RRLLEAMGAT
YWQLLRLLRL RAALPMIFTG IKVAITYSVI GAVLAEWIGA SAGLGVYIAR SLRAFRTDQV
FVAALVTSLL TIALFSLVSL LERWIVFWKG EH