Gene Cagg_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3055 
Symbol 
ID7269472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3715783 
End bp3716601 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID643567875 
Productdihydroorotate dehydrogenase 
Protein accessionYP_002464349 
Protein GI219849916 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000281281 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGATC TTGCCCCCCA TAACCCACAC ACCCTGACCA TCACGACACC GGTGATTGCC 
GCTGCCGGTA GTCTCGGTGA TGTCGTTGGG GTGGCTCGAT GGCTTGGCCT CACTCATCCT
CATTCCGACC ACGGTCTCGG CGCGATTATT AGCTCGACCG TTACCGTAGC CGGTCGGCGC
GGCCAACCGC AGATGCTCGC CACGCCGGCC GGCGTACTGT ACCACCACGG TAATGCCAGT
CTGAGTGTCA AGCAGGTGCG TGAACGACTA GCTCCGCGCT GGGCCGGCTA CCACGTACCG
GTGTTGGTGA GTATCGCCGG TGCGGAGGCT GCCACTGTTG CCGCTGCCCT CGACGGTGTC
GCCGGTGTTG CCGGCTTCGA GGTGGCTTTG CCGGCGCTCA CCGCCGCCGA AGCAGCGCAG
CGGGTCGCGG CTGTACGACG TGCGACTCTC TTGCCGCTGA TTGTTCGTCT GCCCGGTGAA
TTACCCGATC CGGTGGCCGT GGCACAAGCT AGTATTGCTG CCGGTGCTGA TGCAATTGCC
TTAATCGGTG GGTTGCCAGC CTGTATGCCA CAGGCAGACG GCCGGCTTGT GTATGGACGG
CTGGGCGGGC CGGCTATTTT TCCTTTGGCA CTCCGCATGG TTGCGGCCGT TGCTGCGGCA
GTGTCGGCGC CGGTGATCGG AATGGGTGGT GTTGCGGCTC CCGATCATGC GCGGACGATG
TTTCATGTCG GAGCACAAGC GGTAGCGTTG GCGAGCGCGT TAGTAACCGA TCTGCGTCGG
GCTAAGCTGA TTGCCGATGC AGTGGGTGCA AGTGACTGA
 
Protein sequence
MIDLAPHNPH TLTITTPVIA AAGSLGDVVG VARWLGLTHP HSDHGLGAII SSTVTVAGRR 
GQPQMLATPA GVLYHHGNAS LSVKQVRERL APRWAGYHVP VLVSIAGAEA ATVAAALDGV
AGVAGFEVAL PALTAAEAAQ RVAAVRRATL LPLIVRLPGE LPDPVAVAQA SIAAGADAIA
LIGGLPACMP QADGRLVYGR LGGPAIFPLA LRMVAAVAAA VSAPVIGMGG VAAPDHARTM
FHVGAQAVAL ASALVTDLRR AKLIADAVGA SD