Gene Cagg_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2998 
Symbol 
ID7266529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3667515 
End bp3668135 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content56% 
IMG OID643567820 
Productribosomal protein S4 
Protein accessionYP_002464294 
Protein GI219849861 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00785982 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCGAT TTCGAGGGCC CGTCGGCAAA GTGAGTCGAC GATTGGGCAT TGGTATCACC 
GAAAAAGGTC AGCGTATTCT CAATAAGCGG CCAGACCCAC CGGGTCAGCA CGGCGCGGCT
GCCCGTCGCC GGGCGTTGTC TGACTACGGT GCGCAGTTGC GCGAAAAGCA GAAGGCAAAG
TTTATTTATG GCGTCCTTGA GCGCCAGTTC CGCCGTCTGT TCGAGCAGGC GGCGCGACGC
AGCGGAGTAA CCGGCGAGTA TTTGCTGAGT TTGCTCGAGC GCCGACTTGA TAATGTGGTG
TATCGTCTTG GGTTTGCTAC GACCCGCGCT CAGGCTCGCC AGTTGGTAAA CCATGGGCAT
ATCGTTGTTG ATGGTCGCAA GACGAATATT CCGTCGTATA CGGTGAAAGT TGGGCAGGTA
ATTGCAGTGC GACCACAAAG CCGCAGCCGT ACATATTTCA AGAATTTGGT CGATAGCGGT
GTGCTCAACA AGCATCGTGC TCCGGAGTGG TTACGCTTGA ATCCTGCCGA ACTCTCAGGC
ACGGTTGTCG CGTTGCCACG CCGTGAGGAT GCTGAGGCCG GGATTAATGA GCAGTTGATC
GTCGAGTTCT ATAGCCGGTA A
 
Protein sequence
MARFRGPVGK VSRRLGIGIT EKGQRILNKR PDPPGQHGAA ARRRALSDYG AQLREKQKAK 
FIYGVLERQF RRLFEQAARR SGVTGEYLLS LLERRLDNVV YRLGFATTRA QARQLVNHGH
IVVDGRKTNI PSYTVKVGQV IAVRPQSRSR TYFKNLVDSG VLNKHRAPEW LRLNPAELSG
TVVALPRRED AEAGINEQLI VEFYSR