Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2980 |
Symbol | |
ID | 7266511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3651994 |
End bp | 3652842 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643567802 |
Product | TPR repeat-containing protein |
Protein accession | YP_002464276 |
Protein GI | 219849843 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.117357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00166052 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCTTGT CGAAGCAAGA TGAAAAGTTG CGGATTCGCC GCCGTCTCCA AGAAAAAGCT ATTGAACTGG CGGCGTTGAA TCGCTGGCAA GAAGCGGCTG AGTTAAACCA ACAGTTGCTG CGCGTGGTCG AAGATGCCGA GACGTATAAT CGCCTCGGTA AGGCGCTATT TGAACTCGGT AAGTATGCCG AAAGTTATCG CGCGTATCAG AATGCGCTGC GCCTGAATGC ATCGAATCCG ATTGCCCGTA AAAATGTCGC TCGCCTTGAG TCGTTGTTGG CGCGTGGCAT TACCGAAGCA CCGGTTACGC GCTCGACGCG CCAGCAAGTT GATATGCGGA TGTTCATTAC CGAAACCGGC CGCACGGCGC TGACTTCACT GGTCGATGTG CAGCGTGGCC CCACCGTTGA TGCACTTATT ACCGGCGAGA AGGTTGAACT GCGCGTTGAG GGCAAGATGG TCTACGTCGT TGATCTCGAC GGTAATCTGA TCGGGCGTGT CGAACCTAAG CTGAGTCATC GGCTCGTTGA GCTGATAAAC GGTGGGAATC GCTATCTCGC TGCCGTGGTT CAGGCTGACG CGCGCAATGT GCGGATCCTC ATCCGCGAGA TCTATCAGGA TCCGAGCCAG CGCGGACGAG TCTCTTTTCC CGGCAAGTTT GGCGAAGGTG CGACTATTCT CTCTTCGTTC CGCTTTGATG AGTACGAAGA TGTCCTCGAC GAAGAAGAGT TGGTCGAAGA GCCGGAGACC CTTGACGAAG AATATATCGG CGGCGATGAG GAAGATGAAG TCGGTTTGGA CGAAATCGAT CAAGATATCG CCGACGATGA TGATACGCTT GAAGAATAG
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Protein sequence | MTLSKQDEKL RIRRRLQEKA IELAALNRWQ EAAELNQQLL RVVEDAETYN RLGKALFELG KYAESYRAYQ NALRLNASNP IARKNVARLE SLLARGITEA PVTRSTRQQV DMRMFITETG RTALTSLVDV QRGPTVDALI TGEKVELRVE GKMVYVVDLD GNLIGRVEPK LSHRLVELIN GGNRYLAAVV QADARNVRIL IREIYQDPSQ RGRVSFPGKF GEGATILSSF RFDEYEDVLD EEELVEEPET LDEEYIGGDE EDEVGLDEID QDIADDDDTL EE
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