Gene Cagg_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2980 
Symbol 
ID7266511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3651994 
End bp3652842 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content54% 
IMG OID643567802 
ProductTPR repeat-containing protein 
Protein accessionYP_002464276 
Protein GI219849843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.117357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00166052 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTTGT CGAAGCAAGA TGAAAAGTTG CGGATTCGCC GCCGTCTCCA AGAAAAAGCT 
ATTGAACTGG CGGCGTTGAA TCGCTGGCAA GAAGCGGCTG AGTTAAACCA ACAGTTGCTG
CGCGTGGTCG AAGATGCCGA GACGTATAAT CGCCTCGGTA AGGCGCTATT TGAACTCGGT
AAGTATGCCG AAAGTTATCG CGCGTATCAG AATGCGCTGC GCCTGAATGC ATCGAATCCG
ATTGCCCGTA AAAATGTCGC TCGCCTTGAG TCGTTGTTGG CGCGTGGCAT TACCGAAGCA
CCGGTTACGC GCTCGACGCG CCAGCAAGTT GATATGCGGA TGTTCATTAC CGAAACCGGC
CGCACGGCGC TGACTTCACT GGTCGATGTG CAGCGTGGCC CCACCGTTGA TGCACTTATT
ACCGGCGAGA AGGTTGAACT GCGCGTTGAG GGCAAGATGG TCTACGTCGT TGATCTCGAC
GGTAATCTGA TCGGGCGTGT CGAACCTAAG CTGAGTCATC GGCTCGTTGA GCTGATAAAC
GGTGGGAATC GCTATCTCGC TGCCGTGGTT CAGGCTGACG CGCGCAATGT GCGGATCCTC
ATCCGCGAGA TCTATCAGGA TCCGAGCCAG CGCGGACGAG TCTCTTTTCC CGGCAAGTTT
GGCGAAGGTG CGACTATTCT CTCTTCGTTC CGCTTTGATG AGTACGAAGA TGTCCTCGAC
GAAGAAGAGT TGGTCGAAGA GCCGGAGACC CTTGACGAAG AATATATCGG CGGCGATGAG
GAAGATGAAG TCGGTTTGGA CGAAATCGAT CAAGATATCG CCGACGATGA TGATACGCTT
GAAGAATAG
 
Protein sequence
MTLSKQDEKL RIRRRLQEKA IELAALNRWQ EAAELNQQLL RVVEDAETYN RLGKALFELG 
KYAESYRAYQ NALRLNASNP IARKNVARLE SLLARGITEA PVTRSTRQQV DMRMFITETG
RTALTSLVDV QRGPTVDALI TGEKVELRVE GKMVYVVDLD GNLIGRVEPK LSHRLVELIN
GGNRYLAAVV QADARNVRIL IREIYQDPSQ RGRVSFPGKF GEGATILSSF RFDEYEDVLD
EEELVEEPET LDEEYIGGDE EDEVGLDEID QDIADDDDTL EE