Gene Cagg_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2947 
Symbol 
ID7268820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3611071 
End bp3611889 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content59% 
IMG OID643567769 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_002464243 
Protein GI219849810 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.810347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0042807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCACTG ACTTGCCAAT TGCCGTGATT GGTGCCGGTG CGATGGGTGA AGCGATCATC 
GGCGGTCTTT TGCGCAACGA ACTCGTCACA CCCGATCAGA TACTGGCCAG CCATCCCCGT
GACGATCGCC GGCGCGATCT CGCTCATCGC TACGCGATTC ACACAACCCA CGACAATCTC
GAAGCGGCTA AATGGGGGCG GGTTGTCATT TTTGCCGTCA AACCACAACA GTTACGACGC
ATTTTACCGC CATTGCGTGG TGCAATCCGC GACGAAGATC TCGTGATCTC GGTGATTGCC
GGGGTCACCA TCGCTACGTT TGCCGAGGCC CTCGATCACC AAGCTATCGT GCGGAGCATG
CCAAACACGC CTGCCCAAAT CGGTGCCGGT ATGACGGTAT GGACGGCGGC GTCCGCCGTG
ACCGAGCATC AGCGGAGGTG GGCAGCGACA GTACTCGGTG CGCTGGGACG TGAGTTGTAC
GTTGATAACG AGACGTATCT CGATATGGCT ACCGCGATTA ACGGGACGGG GCCAGCTTAC
GTCTTTTTGA TGATGGAAGC GATGATCGAT GCCGGCGTCC ACCTCGGCTT ATCGCGCCGC
ATCGCCGAGG AGCTAGTCCA GCAGACGATG CTCGGTTCGG TACAGTACGC GATGCAGAGT
GGTCTCCATC CGGCACAGTT GCGCAATGCA GTTACCTCAC CTGGCGGCAC CAGCGCTGCG
GCACTGAGCG AACTTGAACG GGGTGGATTA CGGACAGTGC TGGCCGATGC GATCTGGGCT
GCTTACCGTC GTTCGGTTGA ATTGGGAAGG CAGGGCTAG
 
Protein sequence
MLTDLPIAVI GAGAMGEAII GGLLRNELVT PDQILASHPR DDRRRDLAHR YAIHTTHDNL 
EAAKWGRVVI FAVKPQQLRR ILPPLRGAIR DEDLVISVIA GVTIATFAEA LDHQAIVRSM
PNTPAQIGAG MTVWTAASAV TEHQRRWAAT VLGALGRELY VDNETYLDMA TAINGTGPAY
VFLMMEAMID AGVHLGLSRR IAEELVQQTM LGSVQYAMQS GLHPAQLRNA VTSPGGTSAA
ALSELERGGL RTVLADAIWA AYRRSVELGR QG