| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2925 |
|---|
| Symbol | |
|---|
| ID | 7268797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3589043 |
|---|
| End bp | 3590560 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643567746 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_002464221 |
|---|
| Protein GI | 219849788 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0483803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTTC ATCTCTTCGT GCCAATTGTT TCACCCCTGA TCGGTGCAGC ACTGGCCGTC
TTGTTTCACC ACCAACGCCT CGTTGCGAGG TCTATCACCA TCACCAGCAT ACTCATTAAC
CTCGGGTACG GCCTATGGCT GATGAGTGTT GTGCCGACAA GTGGGCCGTT AGTGGCGCAG
GCATCGGGTT GGCTGGCGCC GTTTGGTATC TCGTTGGTCG TTGATGGCAT GAGCGCGCTC
ATGGTGATGC TGGCAGCATT GCTCATGCTT CCTACCGTCA TCTATAGCTT TTACTCGGTA
GATAACGAGC GCGAACGACA CTTCTATTAT CCACTCTTGT TACTCTTGTT GCTCGGCGTC
AGCGGTGCGT TTCTGACCGG CGATCTCTTC AACCTGTACG TTTGGTTTGA GGTATTACTG
GTGGCCTCAT TTGGCCTGAT AACGCTCGGT GGTAGCCGTG ACCAGCTCGA AGGTGGCTTG
AAGTATGTGG TGCTCAATCT GTTGGGTAGT ACCAGTTTTC TGTTTGGGTG TGGATTGACC
TACGGATTTG CCGGGACGCT CAATATGGCG CATATTGCCG AGCGTATGGC AACGCTCGGT
AATCCCGGTT TGCAGACGGT GCTGGCCGGC ATCTTTCTCT TTGCCTTTGG CAGCAAAGCG
GCAATTGTGC CCCTCTTCTT CTGGCTACCA TCGAGTTACC ATACACCACC GGTCGCGGTA
ACGGCAATCT TTAGTGGCTT GATGACGAAG GTGGGTGTCT ATTCACTTTA CCGGGTGTTT
GGGTTGCTGT TCCAGAACGA ATTGGCGATC TATGGGCCGT GGATTATCCT GCTGGCCGGT
CTGACGATGG TGATTGGCGT GTTGGGGGCA GTGGCGCAGA TGAATGTACG CCGGATTCTT
AGCTTTCACA TCATCAGTCA GATCGGCTAT AGCGTGATGG GGTTAGGCTT GGCGAGTGCT
GCCGGCCTCG CCGCCGGTCT TGTCTTTACC GCCCACGTGA TGATCGTCAA GATGGCGCTG
TTCTTTATCG GGGGAGCTGC CGAACAAATC AACGGGACCG GCGATCTGAA GAAGATGGGT
GGTCTGGCTC GGCGCGAACC GTGGCTGGGG TTGTTCTGGT TCCTTGGCAT TCTCTCGCTG
GCCGGCATCC CACCTCTGAG TGGTTTTATT GGCAAACTTA TTCTCTTGCA AGTAGGTGTC
AGCCAGCAGG AGTATCTGAT TACGGCTGTT GCCGCCGGCA CGAGTATCTT GACCTTCTTC
TCGATGCTCA AGATCTGGAA CGAAGTCTTC TGGAAGAAGT CATACGAAGA TGTTAATCGG
TTACCGCGGG TGCGGTTTGG GTTGCTCGCA CCGGGTGCCG CTCTCGTTAT CCTGAGTGTG
GCGCTTGGCT TGCTGGCAGG GCCGTTCGTT GAGTACAACA CGATTGCCGG TCAACAGGCG
TTTGACCGGG CAACATACAT TACCGCCGTC TGTGGGGCAG ATGGTTGTGA AGCGGTGTAT
CGGGCCGCAG TGAAGTAG
|
|---|
| Protein sequence | MVFHLFVPIV SPLIGAALAV LFHHQRLVAR SITITSILIN LGYGLWLMSV VPTSGPLVAQ
ASGWLAPFGI SLVVDGMSAL MVMLAALLML PTVIYSFYSV DNERERHFYY PLLLLLLLGV
SGAFLTGDLF NLYVWFEVLL VASFGLITLG GSRDQLEGGL KYVVLNLLGS TSFLFGCGLT
YGFAGTLNMA HIAERMATLG NPGLQTVLAG IFLFAFGSKA AIVPLFFWLP SSYHTPPVAV
TAIFSGLMTK VGVYSLYRVF GLLFQNELAI YGPWIILLAG LTMVIGVLGA VAQMNVRRIL
SFHIISQIGY SVMGLGLASA AGLAAGLVFT AHVMIVKMAL FFIGGAAEQI NGTGDLKKMG
GLARREPWLG LFWFLGILSL AGIPPLSGFI GKLILLQVGV SQQEYLITAV AAGTSILTFF
SMLKIWNEVF WKKSYEDVNR LPRVRFGLLA PGAALVILSV ALGLLAGPFV EYNTIAGQQA
FDRATYITAV CGADGCEAVY RAAVK
|
|---|
| |