Gene Cagg_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2905 
Symbol 
ID7268777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3565209 
End bp3566702 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content54% 
IMG OID643567726 
ProductABC transporter related 
Protein accessionYP_002464201 
Protein GI219849768 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.077452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CAACACCTCG TCTAACCCTC AGCAACATTG TCAAAACATT TCCGGGCGTA 
CAGGCGGTAA AAAACGTCAG TCTTGAAGCG TACAGCCACG AGATTCTCGC GTTGGTAGGT
GAAAACGGCG CCGGTAAATC AACCCTGATG AATATCATCA ACGGGATCGT TCAACCCGAT
AGCGGTACGA TCATGCTCGA CGGGCAACCC GTCATCATCG ACTCACCGCG ACGCGCGCAA
GCGTTAGGGA TCACGATGAT CCATCAAGAG CTAGCGCTCC TTCCCGAACT GACGGTTGGG
CAAAACATGT TCTTGGGGCG TGAACCGCAC CGAGCCGGTT GGATCGATTG GAAGCGGTTG
TATCAACAAG CGCAGCAAGC TCTTGATCGG TTAGGGATCG CCATCTCGGC GCGGGCAAAG
GTAGCAGATT TGAGCATTGC CGAGCGACAA CTGGTTGAGA TTGCGCGGGC GTTGTCGTAC
CAGGCACGGC TGATTGCCCT CGACGAACCG ACCAGCTCGC TGACCGAGCG CGAAACCGAA
ATCCTCTTCC GTTTGGTACG CCAACTACGG GCCGAAGGGG TTGCATTGAT CTACATCTCA
CACCGCCTTG ATGAGATCTT TGCTCTTGCC GACCGCATTG CTGTAATGCG CGATGGCGAA
TTGGTATCGG TCGGATCAAC CAATGAGTTT ACCGCTCAGC GCTTAGTCCA ACTGATGGTT
GGGCGGTCGT TGCAGGCGAC TGAACCCACC CTGGTTGCAC AGCGCGGAGA GCCGCTGATC
CGAGCCGTCA ATCTGCACGC CGGTAAGGAG GTGCGCGGCG TATCGTTCAC GCTCCATCGC
GGTGAGATTG TCGGCATGGC CGGACTGGTC GGCGCCGGAC GTACCAATGT CGCCCGTCTG
CTGTTTGGGG CTGATCGACT CGATCAAGGT GAGCTATGGT TTGAAGGGCA ACCGGTTCGG
CTCCGCTCAC CACGTGACGC CATCAAGCTC GGCATCGGAT TTGTGACCGA AGATCGCAAG
ATGCAAGGAC TTTTTCTCAA GCAGAGTGTA CGCAACAACG CTGCTACCGG CTTGATCGAG
CGATTATCGC GGCTTGGTTT CATAGAATTT CGCACGTTGA ACAAACATAT CGCCGAACTT
ATCAATCAAT TACGAGTACG CACACCATCG TTACAACAAC AGGTACGGAA TCTCTCCGGT
GGTAATCAAC AAAAAGTGAT CATTGCACGC TGGTTAGCCC TCAAACCAAA GCTACTTATC
CTTGACGAAC CAACCCGTGG GGTTGATGTA GGCGCCAAAG CTGAAATTCA TGCCCTCATC
CGTGAGTTAG CGAACCAAGG AATGGCTATT CTGATGATTT CGTCAGAGCT ACCCGAAATC
CTGGCCGTGA GTGACCGGAT TATTGTGATG CGAGAAGGAA GGATTACAGC CGAATTTAGC
CGCAGAGAAG CGAGCCAAGA TCGGATTATG CAAGCAGCGG TGGGACAAGG GTAA
 
Protein sequence
MTTTTPRLTL SNIVKTFPGV QAVKNVSLEA YSHEILALVG ENGAGKSTLM NIINGIVQPD 
SGTIMLDGQP VIIDSPRRAQ ALGITMIHQE LALLPELTVG QNMFLGREPH RAGWIDWKRL
YQQAQQALDR LGIAISARAK VADLSIAERQ LVEIARALSY QARLIALDEP TSSLTERETE
ILFRLVRQLR AEGVALIYIS HRLDEIFALA DRIAVMRDGE LVSVGSTNEF TAQRLVQLMV
GRSLQATEPT LVAQRGEPLI RAVNLHAGKE VRGVSFTLHR GEIVGMAGLV GAGRTNVARL
LFGADRLDQG ELWFEGQPVR LRSPRDAIKL GIGFVTEDRK MQGLFLKQSV RNNAATGLIE
RLSRLGFIEF RTLNKHIAEL INQLRVRTPS LQQQVRNLSG GNQQKVIIAR WLALKPKLLI
LDEPTRGVDV GAKAEIHALI RELANQGMAI LMISSELPEI LAVSDRIIVM REGRITAEFS
RREASQDRIM QAAVGQG