Gene Cagg_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2901 
Symbol 
ID7268773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3562535 
End bp3563527 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content56% 
IMG OID643567722 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_002464197 
Protein GI219849764 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0317002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGCC GTCTCTTTGG ACGCGCTCAA GATGCACCGC GTAGCGAAGA AGAAGCTGCC 
CGTGAACAAG AGCAGGTTGC TGCTTCGCTG GAAAAATCGC GCCAAGGTAT TTTTGGTCGG
ATCGCAAAAC TCTTCGCCAA CGATGATCCG ATCACCGATC AATTGTGGGA CGAACTTGAA
GAGGCGTTGA TCCAGGCTGA TGTCGGTCTG GAAACAACGC AGTATCTCGT CAATCGCACC
ATCGACCGTG TGAATCGTTA CGGCGTCAAG AAAGCACGTG AAGCGCGCGA GATGCTCAAG
GCCGAGATGG TGCGTACCTT TGCCGAATAT GCCGGTCAGC AGCGTCCTGA TGCTAAACCG
TATGTGATTT TGGTCGTCGG TGTGAATGGA GCCGGCAAGA CCACCCTCAT CGCGAAGCTT
GCTCACCGCT ATAAAAATCG CTTCGGCAAG AAGGTACTGC TTGCCGCCGG CGATACCTTC
CGTGCTGCTG CCACCGAGCA GCTTGAGACG TGGGCAGAGC GAGCCGGCGT GCCATGCGTC
AGCCTTGGTC AAGGCGCTGA TGCGGCGGCA GTGGTGTATA AGGCGATCGA TGCCGCGCTT
GAGCAAGATG TCGATATCTT GATCGTCGAT ACCGCCGGTC GCTTGCATGC CAAGTACAAT
CTGATGCAAG AGCTTGAGAA GATTCGCAAT ATTATTGCGC GTAAGCTGCC CGGTGCGCCC
CACGAGACGA TCCTGGTGAT CGATGCGACC ACCGGCCAGA ACGGGGTGTT ACAGGCCAAA
GCTTTTCTCA AGGCTGCCGG TGTGACCGAT GTGGCCGTGA CGAAAATGGA TGGGACGGCA
AAGGGTGGGA TCGCCTTTGC CATTGCGCAA GACATCGAAC GCCCGATCCG CTACATCGGC
ACCGGCGAGA AGCTCGACGA TCTGGCGCTG TTCGACGCGC AAACCTTTGT TGATGCGCTC
TTTGCTGAAC CAACCGCGGT GAAGAATTCG TAA
 
Protein sequence
MFRRLFGRAQ DAPRSEEEAA REQEQVAASL EKSRQGIFGR IAKLFANDDP ITDQLWDELE 
EALIQADVGL ETTQYLVNRT IDRVNRYGVK KAREAREMLK AEMVRTFAEY AGQQRPDAKP
YVILVVGVNG AGKTTLIAKL AHRYKNRFGK KVLLAAGDTF RAAATEQLET WAERAGVPCV
SLGQGADAAA VVYKAIDAAL EQDVDILIVD TAGRLHAKYN LMQELEKIRN IIARKLPGAP
HETILVIDAT TGQNGVLQAK AFLKAAGVTD VAVTKMDGTA KGGIAFAIAQ DIERPIRYIG
TGEKLDDLAL FDAQTFVDAL FAEPTAVKNS