Gene Cagg_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2860 
Symbol 
ID7267566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3512977 
End bp3514179 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content57% 
IMG OID643567681 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_002464158 
Protein GI219849725 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000103148 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGT TTAGTACTCT CTCCCGCATC CGGGAACCAT TCTCGCCGCC CACCGACCGC 
CCGGTCACAC TGTACGTGTG CGGGGTTACT CCCTACGATA CCACCCATAT GGGCCATGCT
CGCACCTTCA TCGTCTTCGA CGTACTGGTC CGCTACTTAC GCCGGCAGGG CGCAACGGTG
ACGTACTGTC AGAATATCAC CGACGTAGAT GACCCTCTCT TCGAGCGTGC CCGTCGTGAT
GGGGTGAACT GGTACGAACT GGCCGAACGA CAAATTGCTC AATTGCGAGC CGACTGTGCC
GACCTCAATA TTTTGCCGCC AACCTTCGCT CCGCGGGTGA GTGAAGAAGT TGCGATCATG
ATCCCCATTA TCGAGCGACT GGTCGAACTC GGTCATGCGT ATGTAGTTGA CGGCAACGTG
TATTTCAGTA TCCAAACCGA TCCTGACTTT GGCCGCATGG CGCGTATGGG TTATGCCGAG
CTGCTTTCGA TTGCTAATCA GCGGGGCAAT AACCCACATG ACCCCAACAA GCGCGATCCG
CTCGATTTCG TGCTTTGGCA ACGGGGCAAC CCCGACGAAC CCAAGTGGGA AAGCCCATGG
GGCTTGGGGC GACCCGGTTG GCATATTGAG TGTAGCGCTA TGTCGATCCG CTACCTCGGT
GAACAGATCG ATATTCACGG TGGTGGTGCC GATCTGATCT TTCCGCACCA TTCGTGTGAA
ATTGCACAGA GCGAATCGGC CACTGGCAAG CGACCGTTTG CCCGTATCTG GATGCACGTG
GGCTTAGTCT GGCTCGATGG TGAGAAGATG AGTAAATCGT TGGGCAATTT GGTCTTCGCC
CGTGATGCGT TGCAGATGCA TCATCCCGAT GCGCTCCGGT GGTATTTGCT GAGCGAGCAT
TATCGGGAAG ATTTCGATTA CCGACGCGAA GCGGTCGCTC GCTACGAACA GTACGCTGCC
GACCTCCGTC ACGCACTGAG CCTGACCGGT GGCACCCATA GCCCGCTCGA TGTGAGCCGT
GGCCGTTCTG ATGTCATCAC GTCAATGAAT GACGATCTCG ATACACCGGC TGCGTTGGCG
TCGTTGCATG CGATGGCCGG CATGATCATC GATGCTGCCG CCGAGGGCCG TGATGTCAGC
ACGGCTCAGG CGACGGTGCG CGATTTGGCG TTGATGCTAG GGTTTACGTT GCGCGATAAG
TAG
 
Protein sequence
MQLFSTLSRI REPFSPPTDR PVTLYVCGVT PYDTTHMGHA RTFIVFDVLV RYLRRQGATV 
TYCQNITDVD DPLFERARRD GVNWYELAER QIAQLRADCA DLNILPPTFA PRVSEEVAIM
IPIIERLVEL GHAYVVDGNV YFSIQTDPDF GRMARMGYAE LLSIANQRGN NPHDPNKRDP
LDFVLWQRGN PDEPKWESPW GLGRPGWHIE CSAMSIRYLG EQIDIHGGGA DLIFPHHSCE
IAQSESATGK RPFARIWMHV GLVWLDGEKM SKSLGNLVFA RDALQMHHPD ALRWYLLSEH
YREDFDYRRE AVARYEQYAA DLRHALSLTG GTHSPLDVSR GRSDVITSMN DDLDTPAALA
SLHAMAGMII DAAAEGRDVS TAQATVRDLA LMLGFTLRDK