Gene Cagg_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2628 
Symbol 
ID7267219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3221997 
End bp3223748 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content56% 
IMG OID643567454 
ProductABC transporter related 
Protein accessionYP_002463933 
Protein GI219849500 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCACC TGCGTATCCT GTTTCCGTAC CTACGCCGTT ACCAACATCG TCTGCTCCTC 
GGCTGCTTGG CCGCCGCGCT CGGCGCCATT GTTAGCTCAC TCGGCCCACT GGTGTTGCGC
TTCGCCGTTG ATAGTCTGGC CGGTGGTGTG ATCGACCCTC GCCAATTACT GATCTTTGGT
GGTGTGTTGA TCGGGTTGAC CCTCCTCGAT GGCGCACTCA AGTTTACGCA ACGAATGCTG
ATTGCCGTCA CTTCCTACCG AATCGAGAAA GATATACGCA CCGATCTGTT TAACCGTTTG
CTCAGCCTCG ATCAGGCTTT TTACCAGCGC CACTATACCG GCGATCTGAT GGCCCGTCTG
ACCAATGACC TGAGCGCCGT GCGCCAGTTC CTCGGTCCCG GTCTCAACGG TGCAGCGACT
GCTTTGCTCA CCTTCTTGGC AGCCGCCGTG CTGATGTTCG TGACCCAGCC GTTACTGGCG
CTGCTGGTCG TGCTTTTGTT GCCGATGGCA ACCATCGTCT TTGTCGTGAT CGGCAGCCGG
ATGCGCCAGA TTTTTCACCG CGTCCAGGAT CAGTTCGGTG TCTTGTCGAC CCGTGCCCAA
GAGAGTTTTG CCGGTATTCG CACGATTAAG GCATTTGCCC AGGAAGAAGC TGAGATTGCC
GTCTTTACGA ACGATAACGA ACGCTACCGC GACCTTAATC TGCGCTATGT GTTGTTGTCA
GGTGCGCTCT GGCCGGCGAT GACCCTCTGC CTTGGTCTGA TCTCGGCATT GATCTTGCTC
ATCGGCGGGC AAATGGTTGC TGCCGGTACG TTGACCATCG GTGAGTTGGT TCAGTTTAAC
GCCTATTTGG CTTTGCTGGC GTTCCCCATG ATTATTTTAG GATGGATGGT CAATTTATAT
CAACAAGCTA CTGCGTCACT CGAACGGTTG AACGGGATCC TGCGCTGCCA ACCCACCATT
ACTTCACCGC CAACCCCACG GCGACCGACC GGTCATGGAA CTATCGAATT TCGCGGTGTT
GGCCTACGCG CCGATAGTAA TGACCGCTGG TTGCTGCGCA ATCTGTCGTT TACCGTTCCC
GCCGGCAGCT CTCTGGCAAT TGTCGGTGCG ACCGGCGCCG GCAAAACGAC GCTGGTTAAC
TTGATCGGGC GGGTGTGTGA CCCCGATGAA GGACAGGTGC TTATCGATGG AGTTGATGTG
CGAGACCTCG ATTTGGCTGC CCTCCGCCAG ATGATCGGGT ATGTGCCACA AGAGAGTTTT
CTGTTCAGTC TACCGCTGCA AGAAAATATC GGGTTTGGTG TTTCCGACAT TGACCCACTA
CGCCTGAAGC GAGTCATCGA GGTGTCGCGG TTGGTAAACG ATCTCGACCG GTTTCCCGGC
GGCCTCGAGA CAATGGTCGG TGAACGCGGG GTTACGCTAT CGGGCGGACA GAAGCAGCGT
GTGGCAATCG CCCGTGCGCT GATGCGCGAC CCACGTATTC TGATTCTCGA TGATGCGTTG
AGTAGCGTCG ATACCCACAC TGCAGCCCAG ATCCTGGCCG GGTTGCGGGT TGAGATGCGT
GGACGAACAA CGATCATTAT CGCGCAACGC ATCGCAACAG TACGCGATGC CGATCAAATA
ATCGTACTTG AAGATGGTCA GATCGTTGAG CAGGGGTCAC ATCAGACGTT ACTTGCCCGC
AACGGTCGCT ACGCCGCGAT GTATCGTCGG GAGTTACTCG CTGCCGAACT AGACCAAGAA
GAGAACACTT AA
 
Protein sequence
MHHLRILFPY LRRYQHRLLL GCLAAALGAI VSSLGPLVLR FAVDSLAGGV IDPRQLLIFG 
GVLIGLTLLD GALKFTQRML IAVTSYRIEK DIRTDLFNRL LSLDQAFYQR HYTGDLMARL
TNDLSAVRQF LGPGLNGAAT ALLTFLAAAV LMFVTQPLLA LLVVLLLPMA TIVFVVIGSR
MRQIFHRVQD QFGVLSTRAQ ESFAGIRTIK AFAQEEAEIA VFTNDNERYR DLNLRYVLLS
GALWPAMTLC LGLISALILL IGGQMVAAGT LTIGELVQFN AYLALLAFPM IILGWMVNLY
QQATASLERL NGILRCQPTI TSPPTPRRPT GHGTIEFRGV GLRADSNDRW LLRNLSFTVP
AGSSLAIVGA TGAGKTTLVN LIGRVCDPDE GQVLIDGVDV RDLDLAALRQ MIGYVPQESF
LFSLPLQENI GFGVSDIDPL RLKRVIEVSR LVNDLDRFPG GLETMVGERG VTLSGGQKQR
VAIARALMRD PRILILDDAL SSVDTHTAAQ ILAGLRVEMR GRTTIIIAQR IATVRDADQI
IVLEDGQIVE QGSHQTLLAR NGRYAAMYRR ELLAAELDQE ENT