Gene Cagg_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2583 
Symbol 
ID7267172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3150378 
End bp3151361 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content56% 
IMG OID643567407 
Productputative integral membrane protein 
Protein accessionYP_002463888 
Protein GI219849455 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.003396 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAGGGT TCTTAGCTGC TGCCATTCTT AGCTTCGGGC CGGCATTTAT CTATGCAACG 
ATTGCCTACT GGCTCGACCG ATTTGAAAAA GAACCGCGTC GGCTTCTGTT CGGTGCTTTC
TTTTGGGGAG CGTTTGTCGC AACCCTTGGC GCTATTGTCT GGACAGGCCT CGCCCAAGCC
TCACTGGCGA TGTTTATCGG GGAAGCGTCG GCAGAGGTCG CAGGTACCAC CTTGCTCGCG
CCGCTGGTCG AAGAGAGTTT GAAGGGATTA GCAGTTGTTA TCATCATGCT GGCATTCCCT
GAAGAGTTCG ACTCGCGCCT CGACGGGATG CTTTACGCAG CGATCACCGC TCTTGGCTTT
GCCGCCACCG AAAATGTGCT GTATCTCTAC TTTGCCGGGT ACGCAGAAGG TGGGATCGGT
GGCTTGATCA CCCTGTTTGT GCTGCGGGTC ATCTTGGGTG GTTGGGGACA TGCCGTCTAC
ACGGCGTGGA TTGGTTTAGG CCTCGCAATG TCGCGCCTTC ACCCCAACCG CACGGTGCGG
ATTATCTCAC CATTTGCCGG TTGGCTGCTG GCCGTCTGTC TGCACGCCTT GCATAACACG
ATGGCGGTCG TGCTGGCCGG CACATTTGGA TTAACCGGTC TTGGCGTGAC TCTGATTGTT
GATTGGGTGT CGTGGGTTGT GGTGTTGGGC TTAGTACTCT GGGAAATTCG GCGCGAGCAA
CTGCACATTG CCGAGTACCT TGCCGAAGAG GTGAGCGCCG GTCTCATCTC GCCGGCTCAC
TATCATGCTG CCAAATCGTT CAGCGGCCAG CTTCGTAACC GGGTGCGTAG TGCTGCTGCA
CGCCGCTTCT ACGAGGCCTG TGCCGAGTTG GCACACAAAA AGCATCACTT ACTCAACGGT
GTTGGGAATC GACAGAATGT GATGGCACGC ATTCAACAAC TACGTCGCGA AATTGCGCAA
TTGGTGCCGG AAGTGCCGGC GTAG
 
Protein sequence
MIGFLAAAIL SFGPAFIYAT IAYWLDRFEK EPRRLLFGAF FWGAFVATLG AIVWTGLAQA 
SLAMFIGEAS AEVAGTTLLA PLVEESLKGL AVVIIMLAFP EEFDSRLDGM LYAAITALGF
AATENVLYLY FAGYAEGGIG GLITLFVLRV ILGGWGHAVY TAWIGLGLAM SRLHPNRTVR
IISPFAGWLL AVCLHALHNT MAVVLAGTFG LTGLGVTLIV DWVSWVVVLG LVLWEIRREQ
LHIAEYLAEE VSAGLISPAH YHAAKSFSGQ LRNRVRSAAA RRFYEACAEL AHKKHHLLNG
VGNRQNVMAR IQQLRREIAQ LVPEVPA