| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2531 |
|---|
| Symbol | |
|---|
| ID | 7269377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3083494 |
|---|
| End bp | 3084420 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643567357 |
|---|
| Product | HhH-GPD family protein |
|---|
| Protein accession | YP_002463838 |
|---|
| Protein GI | 219849405 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0428971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGC AAATCCGTTC CGATCTGCTC CACTGGTTTC ATTCCTACGC TCGTGACTTG
CCTTGGCGAC GAACTCGCGA TCCGTATGCG ATTATGGTTG CCGAGGTGAT GCTGCAACAG
ACGCAAGTCG ACCGGGTAAT TCCCAAGTAT CAGGCATTTC TCAGCGCGTT TCCTACCGTA
GCCGCCCTGG CCGCCGCGCC GACCGCCGAA GTGATCCGGT TGTGGGCTGG GCTGGGCTAT
AATCGGCGTG CGGTGAATCT GCAACGGGCC GCTCAAGTGA TTATGGAGCA GTACGGGGGG
CAGGTGCCGT CGGCGGTGGC CGATCTGCGC GCATTGCCCG GTATTGGCCC TTATACTGCC
GGTGCGATAG CCTGTTTTGC GTTTGAGCAG GATGTAGCCT TCCTCGATAC CAACATTCGC
CGGGTGGTGC GACGATTGTG CGTTGGCCCC GATGACCGGT CCACGCCCTC CGATGGCGAG
TTGTTGGCAC ACGCCACGGC TCTGATTCCG CCGGGACAGG GTTGGACGTG GAATCAGGCG
ATTATGGAGT TGGGTGCTTT AATCTGTACG TCGACGAACC CGGCGTGTTG GCGCTGCCCA
CTCCGTAGCT ATTGCCGGTC CTATGCCACT GCGGTTGCCG ACGATACGGC GCTGGCTGCG
ACAATGATGT CACCGCCGCT CAAGCGAGTC GCCGAATCGC GCACTGCTGA GCCATTCGTT
GGGTCACGCC GTTGGTACCG CGGCAAGATC GTCGCCGTGT TGCGCGAGCT GCCCGCCGGT
GAAGTATTAC CGTTGCCGAT CTTAGGAGAA CGGATACGCG CCGACTTTAC CCCCGATCAC
GAACCCTGGT TACAAGGACT GGTAGCCGAT CTGGCCCGCG ATGGGTTGCT GGTGATGACC
GAGGAAGGGG TACGCTTGCC GCAGTGA
|
|---|
| Protein sequence | MIEQIRSDLL HWFHSYARDL PWRRTRDPYA IMVAEVMLQQ TQVDRVIPKY QAFLSAFPTV
AALAAAPTAE VIRLWAGLGY NRRAVNLQRA AQVIMEQYGG QVPSAVADLR ALPGIGPYTA
GAIACFAFEQ DVAFLDTNIR RVVRRLCVGP DDRSTPSDGE LLAHATALIP PGQGWTWNQA
IMELGALICT STNPACWRCP LRSYCRSYAT AVADDTALAA TMMSPPLKRV AESRTAEPFV
GSRRWYRGKI VAVLRELPAG EVLPLPILGE RIRADFTPDH EPWLQGLVAD LARDGLLVMT
EEGVRLPQ
|
|---|
| |