Gene Cagg_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2483 
Symbol 
ID7269329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3020024 
End bp3020899 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content54% 
IMG OID643567310 
Productanti-sigma-factor antagonist 
Protein accessionYP_002463791 
Protein GI219849358 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.872627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.455884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGA TTCTTGCCGA CATCGCTGCC TTCAATGAAG CACGGCTCCC CACTATCGCC 
GAAATCTTCA CCGACCGCCT GCGCGCTCAA CAGGCAAACT ATGCCGCTAT GGATCGGGCG
GCCCTGTTGC AGGCGGTGAC GACATCATTA CAAACCCTAT GGCATGCCGT CGCTACCGAA
GATGTACAGC CCTTTCTTGC CCACGCTCGT GCTATAGGGG AAGCACGGGC AGCGAGCGGT
TTTATTGCCG GTGACATGTT CGCCGCTCTT AATGAACTGC GACATGTCGC TTGGGATACG
ATAGAAGCGT ATGACCGCGA TCGTAAGGTC GTTACCGTCT CGCACGTTCG GCGGGTGGAA
GATATCCTGC AAGCCTTTGG ACAGACTTTG CTTACTAGCT TTAGCCAGGT CTACCGTGAA
GTGCAAGCAC AAATCCACGA TCAGGCTGAC CGGATTGCGG CTCAACAACA GACCATCCGC
GAGCTGAGTA CACCTATCTT GCCGCTGTAC GAAGGCATTT TAGTTCTACC GCTGGTCGGC
GCTATCGATA GCTTTCGCGC CGGCCAGATC ATGGAACGCT TATTGACCGC CATCGCCGAA
CGCCAATCGG ATATCGTCAT CATCGATATT ACCGGCGTAC CCGTCATCGA TACCGCCGTC
GCCAATTACC TCTTGCAGAC GGCACGCGCC GCCCAATTGA TCGGCACACA GGTCATTCTG
GTCGGGATCG GCCCGGAAAT TGCCCAAACC ATGGTCCAGC TCGGCGTCGA TTTAAGTAAC
ATTATCATCG GAGCAAGTTT ACAAAACGGT CTTGAATTAG CGCTGAGCCG CATTGGACGG
GCAATTAAGC CATCGATGGA AAGGTATCTA ATCTAA
 
Protein sequence
MPKILADIAA FNEARLPTIA EIFTDRLRAQ QANYAAMDRA ALLQAVTTSL QTLWHAVATE 
DVQPFLAHAR AIGEARAASG FIAGDMFAAL NELRHVAWDT IEAYDRDRKV VTVSHVRRVE
DILQAFGQTL LTSFSQVYRE VQAQIHDQAD RIAAQQQTIR ELSTPILPLY EGILVLPLVG
AIDSFRAGQI MERLLTAIAE RQSDIVIIDI TGVPVIDTAV ANYLLQTARA AQLIGTQVIL
VGIGPEIAQT MVQLGVDLSN IIIGASLQNG LELALSRIGR AIKPSMERYL I