Gene Cagg_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2428 
Symbol 
ID7266151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2947029 
End bp2947820 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content52% 
IMG OID643567254 
ProductABC transporter related 
Protein accessionYP_002463737 
Protein GI219849304 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCAC TCAACAATAT CGAAGTCATT TATAACGATG TCGTGCTGGT GCTCAAGGGG 
TTGTCGCTCG AGGTGCCGGA GGGTAAGATT GTAGCTTTGC TTGGCTCAAA TGGCGCCGGT
AAGAGTACCA CGCTGAAAGC GATATCCGGC TTGCTCAAGC CGGAGAATGG TGAAGTAACC
GATGGTGAGA TTCTCTTTCA GGGCCAGCCG ATCCACAAAA AAGATGCCTC CGAGATTGTG
CGGATGGGGA TTTTTCAGGT TATGGAAGGG CGGCGGGTCT TTGAGCACTT GACGGTGGAA
GAGAATCTGC GTGCGGGTGC ATATACCCAA TCGATCCGGC GGTTTGGCGA GGATCTGGCG
TTGGTATACG ACTATTTTCC GCGTTTGAAG GAACGACGCA ATCAGGTGGC CGGGTTCCTT
AGCGGTGGTG AGCAGCAGAT GTTGGCGATT GGGCGCGCCC TGATGGCCCA TCCCAAGTTG
ATTATGCTCG ATGAGCCGTC GCTGGGGTTA GCCCCGTTAT TGGTTGCCGA GATTTTTGAG
ATTATTCGTC GGATTAATCG CGAACAAGGC ACGACGATTC TATTGGTCGA GCAAAATGCC
CGTTTGGCGC TTGAATCGGC CCATCACGCC TACATTATGG AAAACGGGCG GATTGTGTTA
GACGGTTCAC CGGCAGATTT GAAAGATAAT GCCGATGTAC GTGAGTTTTA CCTTGGCCTC
AACGAGATTG GTAGTCGCAA GAGTTATCGC GAAGTGAAGC ATTACAAACG GCGCAAACGC
TGGCTGTCGT AG
 
Protein sequence
MLSLNNIEVI YNDVVLVLKG LSLEVPEGKI VALLGSNGAG KSTTLKAISG LLKPENGEVT 
DGEILFQGQP IHKKDASEIV RMGIFQVMEG RRVFEHLTVE ENLRAGAYTQ SIRRFGEDLA
LVYDYFPRLK ERRNQVAGFL SGGEQQMLAI GRALMAHPKL IMLDEPSLGL APLLVAEIFE
IIRRINREQG TTILLVEQNA RLALESAHHA YIMENGRIVL DGSPADLKDN ADVREFYLGL
NEIGSRKSYR EVKHYKRRKR WLS