Gene Cagg_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2390 
Symbol 
ID7268742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2906152 
End bp2906736 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content56% 
IMG OID643567217 
Product4-diphosphocytidyl-2C-methyl-D-erythritol synthase 
Protein accessionYP_002463700 
Protein GI219849267 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.905629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG TCGGTCTCTT GCTTGCTGCC GGTCAATCGT CGCGGATGGG GCAACCGAAA 
CAGTTATTAC TGTGGAAAAA CCGGCCATTG GTTGCCCACA TCGCTCACGA AGCGCTCAAC
AGTCAACTCG ATGGACTAAC CGTAGTGATC GGTGCAGCCG GCGAACATGT ACAAGCTGCG
CTGCGCGATC TACCGGTAAC GATTGTCTCC AATCCGGCCT ACGCTGCAGG ACTCAGTACA
TCGCTCGCAG CCGGTCTCCG CGCTTTACCC TCCGATACAA CGGCAGCGAT GATCTTGCTC
GTCGATCAAC CTCTCGTCAC CAGCCGTCTC ATCAACGATC TTATCGCTGC CTATCGGGCT
ATACCTACAG CTCTTGCGCT CGTTCCAATG TACCAAGGCC AACGTGGCAA CCCGGTCATT
GTCGGCGCAC CACTCTTTGC CGAATTACAA ACGCTCCAAG GCGACACCGG CGCACGCACC
GTCTTCCAGC GCTATACCGA CCAGATCATC TGGTATCAAA CCGACGATCC GGCTGTTATC
ACCGATACCG ACACCCCAGA AGCGTGGCAA GCCCTGAATC CCTAG
 
Protein sequence
MKIVGLLLAA GQSSRMGQPK QLLLWKNRPL VAHIAHEALN SQLDGLTVVI GAAGEHVQAA 
LRDLPVTIVS NPAYAAGLST SLAAGLRALP SDTTAAMILL VDQPLVTSRL INDLIAAYRA
IPTALALVPM YQGQRGNPVI VGAPLFAELQ TLQGDTGART VFQRYTDQII WYQTDDPAVI
TDTDTPEAWQ ALNP