Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2367 |
Symbol | |
ID | 7268717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2877019 |
End bp | 2878245 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643567196 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_002463681 |
Protein GI | 219849248 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0953909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.605774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA TGTTACACCT TGCCGACTTG CATCTCGGGA TCGAAAATTA CGGCGCGCTC GATCCGCGGC GCGGCTTGCA TTCCCGTCTG ATAGATTATC TTGACCGACT TGACGAGGCA ATTACGGTTG GGCTTGATCA TCAGATCGAT CTTTGCCTGA TTGCCGGTGA TGTGTATAAA AACCGTTCAC CTAACCCTAC GGTGCAGCGC GAGTTTGCGA CGCGCATCCG CCGTTTACGC GACGCCAGCG TAGCGGTGGT GATCCTTACC GGTAATCACG ACATCTCACC GGCTCAAGGG CGCGCTCACT CGGTAGAGAT TTTTGCCACA TTGGCCCTCG AAGGGGTGAC GGTGGCCGAC CGCCTACGTC GGTATCGGAT TCCCACGCGC AGTGGCGATC TGCAACTGAT TGCGGTGCCG TGGGTGACAC GCCAAATGTT GCTTACCCGC GACGAAATGG TCGGTGCGTC ATTCGCGACG ATTGAATATG AATTACGTCG TCGATTGGAG CAGTTTATTG AACAGGCGGT GGCTGCGTGC GATACAACGA AACCGACGGT GGTCGCGTTT CATGGCACAG TTGAAGGTGC GCAATTGGGG TCGGAGCGGG CAATGATCTT GGGTCGTGAT CTCAGCTTAC CGCGTTCGAC CTTGGCTCTG CCCGGTGTCG ATTATGTCGC CCTTGGTCAC ATTCATCGTC ATCAGGTGCT TGGTGAACAG CCACCGGTTG TCTATCCCGG CAGTATCGAG CGGATCGATT TTGGTGAACG TGATGAACCG AAAGGATGTG TGCTGGTTGA GCTGGAGCCG GGACAGGCAC GCTGGCAATT TGTGCAACTG TCGGCACGCC CGTTCGTCAG TATCGAACGT GATCTGCGTC AAAGTAGCGA TCCGGTGGGG GCGTTGCGTG CCGCCATCAA TCGTCACGAT CTGCGCGAAG CGGTGGTTCG CGTTGAAGTG CAACTGTCAC GCGAACAGGC AACGTTGCTG CGCGAAGACC ACGTGCGTGA ATGGTTACGT GAAGCCGATG CGGCAGTGAT TGCGGCAATT GTGTTTGATA TCGAACGTCC GGTTCGTCAG CGATTCGCCG GGGTTGCTGA AGCGTTACGT GCCGGTCTTA CACCACGACA CGCGCTCGAA CTCTATCTCA AGAGCAAAAA TACGCCTCCA GAACGGATCG CACAATTGTT GGCTGCTGCG GATGAACTGA TTGGAGGGGA TACGTAG
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Protein sequence | MIRMLHLADL HLGIENYGAL DPRRGLHSRL IDYLDRLDEA ITVGLDHQID LCLIAGDVYK NRSPNPTVQR EFATRIRRLR DASVAVVILT GNHDISPAQG RAHSVEIFAT LALEGVTVAD RLRRYRIPTR SGDLQLIAVP WVTRQMLLTR DEMVGASFAT IEYELRRRLE QFIEQAVAAC DTTKPTVVAF HGTVEGAQLG SERAMILGRD LSLPRSTLAL PGVDYVALGH IHRHQVLGEQ PPVVYPGSIE RIDFGERDEP KGCVLVELEP GQARWQFVQL SARPFVSIER DLRQSSDPVG ALRAAINRHD LREAVVRVEV QLSREQATLL REDHVREWLR EADAAVIAAI VFDIERPVRQ RFAGVAEALR AGLTPRHALE LYLKSKNTPP ERIAQLLAAA DELIGGDT
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