Gene Cagg_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2244 
Symbol 
ID7268047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2742171 
End bp2742815 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID643567075 
Productformyl transferase domain protein 
Protein accessionYP_002463563 
Protein GI219849130 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000634328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTCT TATTTCTCGG CTCAAGTCAG TCGCCCTTAG TCGAGTGGTT ACAATCTGTG 
GGCGAAGAAG TCGTAGCTAC TATGGAACCG ATTGATGTCG CATTTCTAGA TGCATACTCA
CCTGACTTTA TCGTGAGCTA TGGGTACCGC CATATCATCA AGAAAGATGT TCTTCTCCGG
TACACAGGTA GAGCCATCAA TCTTCATATT TCCTACCTCC CATGGAACAG GGGAGCAGAC
CCTAATTTTT GGAGTTTTGT CGAAGACACT CCAAAAGGGG TAACGATTCA TTATCTGAAT
GAAGGGGTTG ACACTGGTGA CATCATTGTT CAAAAACGAG TTACGTTTTC CGAGAGCGAC
ACGTTGAGAA CAAGTTACGA CAAACTTCAA GAAGAAATAC AAGCACTCTT CAAAGACAAC
TGGGCTAGTA TTCGGACGGG GGAATGCCAT CGTAAAAGAC AACAAGGCAA GGGAGCATTC
TATAGGCTCA AAGATAAGGA AAGACTTTCT CACCTTTTAA CTCGCGGATG GGATACACCG
ATTGCGGTTT TGGAAGAATA TGCGGCTGAA ACTCAAATGG TTATGCAGTT TTGGGATACA
TATGACGCTG AAATCAACGA AATACGCAGG CAAGGTACGT CGTGA
 
Protein sequence
MKVLFLGSSQ SPLVEWLQSV GEEVVATMEP IDVAFLDAYS PDFIVSYGYR HIIKKDVLLR 
YTGRAINLHI SYLPWNRGAD PNFWSFVEDT PKGVTIHYLN EGVDTGDIIV QKRVTFSESD
TLRTSYDKLQ EEIQALFKDN WASIRTGECH RKRQQGKGAF YRLKDKERLS HLLTRGWDTP
IAVLEEYAAE TQMVMQFWDT YDAEINEIRR QGTS