Gene Cagg_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2229 
Symbol 
ID7266802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2727381 
End bp2728112 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content57% 
IMG OID643567060 
Productphosphatidylserine decarboxylase-related 
Protein accessionYP_002463548 
Protein GI219849115 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0475225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0214639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGAAT CAAATTACAC TATCAGAATA CCTTCGCATA CGCTGTCGGG TGAGGATATG 
CCAGAGTTAG AGCCGACAAC CAATCAGCGC CCTGTCGCGC TCCCCGGTTT CGATGCCGAA
GCGACCGCCG TAGTCGGTAT TGGTCTAGGT CTTACCGGTC TTGCCCTTGG GTTACGTCCC
CGGCTTGCCC CAGCCACATT AGCCCTTACC GCATTGGCGG CGGCACTCTT TCGCAATCCA
CGCCGTATCC CACCCGACGA ACCACGTACC ATCTTTGCCA TTGCCGATGG CCGGCTCCAA
GGCGTGCGCG AAGTGTATGA ACATCGCTTT GTACACAGCG ACTGCCTCCG CATAACCACC
ATCATCGGTC CGCTTGACGT ACCTATCTGC CGTTCGCCGG TTGCCGGTCG AGTTGCGTAC
CTTGAGCATA TCGACGGTGA ACATCGACCA CTACGCGCTC TGCAAGCACC CGAACGTAAT
CAACGTCTGT ATATCGGGAT CGAGACGGTA TGGGGGCCGG TGCTGTTGGC AATTATCGCA
GCACCACTAG GACGCTGGTT ACGTTGCGAG ACAACACAGG GTGCGACAAT TACCCCCGGC
ACCCGAATTG CCAGCGTGCG TTTTGGCGGG CAGGTTGATC TCTACATTCA ACGCGATGTG
CTTGATCCGC TCGTTGCTCC TGGTGAACGT ATGTTCGCCG GACAAAGCCG GTTGGGTGTA
GTGGTAGTCT GA
 
Protein sequence
MLESNYTIRI PSHTLSGEDM PELEPTTNQR PVALPGFDAE ATAVVGIGLG LTGLALGLRP 
RLAPATLALT ALAAALFRNP RRIPPDEPRT IFAIADGRLQ GVREVYEHRF VHSDCLRITT
IIGPLDVPIC RSPVAGRVAY LEHIDGEHRP LRALQAPERN QRLYIGIETV WGPVLLAIIA
APLGRWLRCE TTQGATITPG TRIASVRFGG QVDLYIQRDV LDPLVAPGER MFAGQSRLGV
VVV