Gene Cagg_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2228 
Symbol 
ID7266801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2726500 
End bp2727369 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content59% 
IMG OID643567059 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_002463547 
Protein GI219849114 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0584067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0428957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCAC CGTTCACTCT TTTATTTGAA GACGATCCGA ACCCAGGTCC CGGCTTGCCC 
TCCTCGATCC GCACGCTTTA CCGTGGCGAT TGGCGACTAC CGACTATTCC CGAACGGCGT
CCTGCAATAT GGACGAACTT TGTGGTTTCA CACGATGGTC GGATCGCCTT CAACCAACCG
GGATGGAACG GCGGAAATGC GATCAGCCGT AACCATCGCC ACGATCACTG GTTGATGGAA
GTGATCCGAG CACGCGCCGA TGCAATTTTG GTCGGTACTG CAACCCTACG TGCTGCTCGT
CGCCATCGGT GGGCACCGGG CGAAGTGTTC AATTGGCCGG CATTTACCCA GCTCCGCGCA
GCCGAAGAAC GCCCGCCATT GCCGGCATTA GTCATTCTCT CGGCGAGCGG TGATGTACCG
GCAGCGGCTG CCCTTACCTC GCCACGTGAT CTGTTTCTCA TCACCACTGC GCAAGGGGCA
GAACACGCAC GTAGCCGTCA TCCACATCTT ACCTGCCTGG TCGGCACCGA TGGTCAACTC
GATCTCACCG CTGCCATGAC CACCCTCCGT CAACAGTACG GTATCCGTAC CTTGCTCAGC
GAAGGTGGCG GACGCACCTA CGGCTCGCTG CTTGCCCACC AGCTCATCGA TGAAGTCTTT
CTGACCATCA GCCCGATCAT CGTCGGCAAC CCTGCTCCAC CGACACCACC CCGGCCCGGT
CTGGTCGAAG GTGTCGCCTT TGCGCCACAA GACCCACCCC GTCTTCGCCT GATCAGCCTG
CGCCGCGTAG ATGATGTTCT CTTCCAACGA GCTGGTATCG TCTTTCCAAC GGACGGAAAG
GTGGCGTCGT TCACATTGGA AGCACAATAG
 
Protein sequence
MIAPFTLLFE DDPNPGPGLP SSIRTLYRGD WRLPTIPERR PAIWTNFVVS HDGRIAFNQP 
GWNGGNAISR NHRHDHWLME VIRARADAIL VGTATLRAAR RHRWAPGEVF NWPAFTQLRA
AEERPPLPAL VILSASGDVP AAAALTSPRD LFLITTAQGA EHARSRHPHL TCLVGTDGQL
DLTAAMTTLR QQYGIRTLLS EGGGRTYGSL LAHQLIDEVF LTISPIIVGN PAPPTPPRPG
LVEGVAFAPQ DPPRLRLISL RRVDDVLFQR AGIVFPTDGK VASFTLEAQ