Gene Cagg_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2178 
Symbol 
ID7266751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2671464 
End bp2672321 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content59% 
IMG OID643567009 
Producthypothetical protein 
Protein accessionYP_002463497 
Protein GI219849064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.96347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCAT TGCGGTTTCT GTTGATCTTG TTCGCAGTCA CCCTCCTCTC CGGCGTAGCC 
ACCGCCCAAC CGGCGGTCAA CCGCGCCGGG GTAGTGGTTC GCTTTGGTAA CGGTGAGGTC
TTTACAACAT GCGTGACGTT TGGCGAGCCG AGTATCAGTG GTCTCGAACT CCTTGAACGC
AGTGGCTTGC CGGTGATTAG TCAGCAGAGC AGTATTGGCG CTGCGGTTTG CAAAATCGGG
TACGAAGGGT GTGACTACCC GGCTACAAGC TGCTTCTGTG CCCGCGAGCA GGGCCGGGTA
GTTTACTGGG CCTTTTACCT GCGAGATCAA AGTGGGTGGC GCTATTCTAA CCTCGGTGCG
AGTAATGTGC AGGTCAGTGA TGGTGATTTA CACGGTTGGG CATGGGGGCC AGGTGACGCC
AGTGGTGGGG CTGTTCCACC TGATGTCACC TTCGCCGATG TCTGTCTCCG AGAGACGGTA
GCAGAGCCGA CTACAACACC GACGGCTACG TCCGAGCCGA CAGCCACGGC GATTGTTATG
CCAACGCAGA CGCCACCGCG ACCCACGACC GCACCGGCAA TGCCCACATT CACGCCTGTA
CCATCGGCAA CTGCGACTGC ATCGGCAATG CCCACATTCA CGCCTGTACC ATCGGCAACA
GCGACCGCAC CGGCAATGCC TACGTCCACG CCCGTACCAT CACCATCGGC AACTGCAACC
GTACTGCCGG CAGGCGGGGT TTCCCAAGTA ACATCGCCTA CTTCAGGCGA TAGCAGCCAG
TGGTGGGGTT TTATTGCATT AGTAGCCCTC TTGCTCGGAG CAATTGTCGT GACGCTCAGA
CGGAGGGGTG CTACTTGA
 
Protein sequence
MRSLRFLLIL FAVTLLSGVA TAQPAVNRAG VVVRFGNGEV FTTCVTFGEP SISGLELLER 
SGLPVISQQS SIGAAVCKIG YEGCDYPATS CFCAREQGRV VYWAFYLRDQ SGWRYSNLGA
SNVQVSDGDL HGWAWGPGDA SGGAVPPDVT FADVCLRETV AEPTTTPTAT SEPTATAIVM
PTQTPPRPTT APAMPTFTPV PSATATASAM PTFTPVPSAT ATAPAMPTST PVPSPSATAT
VLPAGGVSQV TSPTSGDSSQ WWGFIALVAL LLGAIVVTLR RRGAT